Strain Fitness in Shewanella loihica PV-4 around Shew_1424

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,637,845	-		Shew_1423	0.52	-2.1
1,638,222	-		Shew_1423	0.78	-2.3
1,638,857	+				-2.0
1,638,885	-		Shew_1424	0.11	-1.2
1,639,123	+		Shew_1424	0.24	-2.4
1,639,158	-		Shew_1424	0.26	-2.4
1,639,299	-		Shew_1424	0.35	-2.1
1,639,420	-		Shew_1424	0.42	-1.7
1,639,727	-		Shew_1424	0.59	-2.5
1,640,035	+		Shew_1424	0.77	-0.3
1,640,035	+		Shew_1424	0.77	-1.0
1,640,318	+				-1.7
1,641,027	+		Shew_1425	0.85	+2.9
1,641,042	-		Shew_1425	0.87	+3.0