Strain Fitness in Shewanella loihica PV-4 around Shew_1177

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,360,368	+		Shew_1176	0.47	-0.5
1,360,662	-		Shew_1176	0.74	+0.5
1,361,508	-		Shew_1177	0.19	+0.1
1,361,741	-		Shew_1177	0.38	-0.4
1,361,837	+		Shew_1177	0.45	-0.8
1,361,934	+		Shew_1177	0.53	-1.6
1,362,014	-		Shew_1177	0.60	-0.6
1,362,446	-				-0.1
1,362,514	+				-0.0
1,362,613	-				-0.0
1,362,644	+				+0.0
1,362,722	+				+0.2
1,363,335	+		Shew_1178	0.26	-0.2