Strain Fitness in Shewanella loihica PV-4 around Shew_0681

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
774,238	+				-0.0
774,529	+		Shew_0680	0.38	+0.3
774,613	-		Shew_0680	0.48	-0.1
774,699	+		Shew_0680	0.58	-0.0
774,755	+		Shew_0680	0.64	-0.3
775,320	-		Shew_0681	0.13	-0.1
775,402	+		Shew_0681	0.21	-0.3
775,410	-		Shew_0681	0.22	+0.1
775,450	+		Shew_0681	0.25	+0.1
775,557	-		Shew_0681	0.35	+0.4
775,711	+		Shew_0681	0.50	+0.5
775,719	-		Shew_0681	0.50	+0.2
775,779	+		Shew_0681	0.56	+1.4
775,859	-		Shew_0681	0.63	+0.0
775,929	+		Shew_0681	0.70	-0.1
775,932	-		Shew_0681	0.70	+0.1
776,042	+		Shew_0681	0.80	+0.7
776,555	-		Shew_0682	0.20	-0.2
776,737	-		Shew_0682	0.37	+0.2
777,027	-		Shew_0682	0.63	+0.2