Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13040

Experiment: Growth at pH7 and (C) D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at pH7 and (C) D-Glucose
2,944,551	+				-2.5
2,944,551	+				-1.8
2,944,552	-				-2.9
2,944,552	-				+1.1
2,944,682	-		PFLU_RS13035	0.20	-2.6
2,944,777	-		PFLU_RS13035	0.29	+1.4
2,944,777	-		PFLU_RS13035	0.29	-1.0
2,944,777	-		PFLU_RS13035	0.29	-1.2
2,944,777	-		PFLU_RS13035	0.29	-1.4
2,944,777	-		PFLU_RS13035	0.29	-1.2
2,945,035	-		PFLU_RS13035	0.53	-0.6
2,945,184	+		PFLU_RS13035	0.67	-1.0
2,945,185	-		PFLU_RS13035	0.67	+0.4
2,945,185	-		PFLU_RS13035	0.67	+0.0
2,945,586	+				+0.9
2,945,586	+				+1.4
2,945,586	+				+0.8
2,945,587	-				-1.2
2,945,618	+				-0.6
2,945,618	+				-1.0
2,945,618	+				-0.2
2,945,618	+				-1.6
2,945,618	+				-2.2
2,945,618	+				-2.6
2,945,619	-				-0.6
2,945,619	-				-1.0
2,945,619	-				-0.6
2,945,749	+				-2.3
2,945,749	+				-0.6
2,945,749	+				+3.9
2,945,749	+				-1.6
2,945,749	+				+2.1
2,945,749	+				-1.0
2,945,749	+				-1.2
2,945,750	-				+1.4
2,945,750	-				-2.1
2,945,750	-				+2.4
2,945,919	+		PFLU_RS13040	0.10	-0.1
2,945,919	+		PFLU_RS13040	0.10	+0.4
2,945,919	+		PFLU_RS13040	0.10	+0.4
2,945,920	-		PFLU_RS13040	0.10	-2.1
2,945,996	-		PFLU_RS13040	0.12	-1.4
2,946,031	+		PFLU_RS13040	0.13	+1.9
2,946,032	-		PFLU_RS13040	0.13	-1.2
2,946,032	-		PFLU_RS13040	0.13	-1.2
2,946,073	+		PFLU_RS13040	0.14	-2.1
2,946,073	+		PFLU_RS13040	0.14	-2.5
2,946,073	+		PFLU_RS13040	0.14	+0.9
2,946,073	+		PFLU_RS13040	0.14	-1.6
2,946,073	+		PFLU_RS13040	0.14	+2.0
2,946,073	+		PFLU_RS13040	0.14	-2.3
2,946,074	-		PFLU_RS13040	0.14	+0.8
2,946,074	-		PFLU_RS13040	0.14	-2.6
2,946,074	-		PFLU_RS13040	0.14	-1.0
2,946,074	-		PFLU_RS13040	0.14	-1.4
2,946,074	-		PFLU_RS13040	0.14	-1.8
2,946,157	+		PFLU_RS13040	0.16	-2.1
2,946,192	+		PFLU_RS13040	0.17	-2.0
2,946,192	+		PFLU_RS13040	0.17	-1.4
2,946,513	+		PFLU_RS13040	0.26	-2.4
2,946,514	-		PFLU_RS13040	0.26	-0.2
2,946,514	-		PFLU_RS13040	0.26	-0.8
2,946,514	-		PFLU_RS13040	0.26	-0.1
2,946,584	-		PFLU_RS13040	0.28	+1.3
2,946,913	+		PFLU_RS13040	0.37	+0.9
2,946,914	-		PFLU_RS13040	0.37	-2.6
2,946,914	-		PFLU_RS13040	0.37	-2.2
2,946,914	-		PFLU_RS13040	0.37	+1.3
2,947,096	+		PFLU_RS13040	0.41	-1.7
2,947,096	+		PFLU_RS13040	0.41	-3.0
2,947,096	+		PFLU_RS13040	0.41	+1.3
2,947,096	+		PFLU_RS13040	0.41	+0.8
2,947,097	-		PFLU_RS13040	0.41	-0.7
2,947,129	+		PFLU_RS13040	0.42	-1.8
2,947,129	+		PFLU_RS13040	0.42	-1.2
2,947,129	+		PFLU_RS13040	0.42	-1.2
2,947,129	+		PFLU_RS13040	0.42	-1.0
2,947,129	+		PFLU_RS13040	0.42	-1.0
2,947,129	+		PFLU_RS13040	0.42	-1.2
2,947,129	+		PFLU_RS13040	0.42	-1.0
2,947,129	+		PFLU_RS13040	0.42	-2.7
2,947,130	-		PFLU_RS13040	0.42	-1.0
2,947,130	-		PFLU_RS13040	0.42	-0.7
2,947,130	-		PFLU_RS13040	0.42	-0.1
2,947,130	-		PFLU_RS13040	0.42	-1.5
2,947,130	-		PFLU_RS13040	0.42	-1.2
2,947,130	-		PFLU_RS13040	0.42	-0.7
2,947,142	-		PFLU_RS13040	0.43	-1.0
2,947,142	-		PFLU_RS13040	0.43	+0.3
2,947,162	+		PFLU_RS13040	0.43	-1.7
2,947,162	+		PFLU_RS13040	0.43	-1.0
2,947,162	+		PFLU_RS13040	0.43	-1.0
2,947,162	+		PFLU_RS13040	0.43	-2.1
2,947,163	-		PFLU_RS13040	0.43	-1.2
2,947,163	-		PFLU_RS13040	0.43	-1.5
2,947,281	+		PFLU_RS13040	0.46	-2.2
2,947,281	+		PFLU_RS13040	0.46	+0.1
2,947,282	-		PFLU_RS13040	0.46	+0.2
2,947,282	-		PFLU_RS13040	0.46	-3.2
2,947,282	-		PFLU_RS13040	0.46	-0.7
2,947,391	-		PFLU_RS13040	0.49	-1.2
2,947,429	+		PFLU_RS13040	0.50	+0.3
2,947,429	+		PFLU_RS13040	0.50	-0.1
2,947,429	+		PFLU_RS13040	0.50	+0.7
2,947,430	-		PFLU_RS13040	0.50	-1.4
2,947,432	+		PFLU_RS13040	0.50	-2.7
2,947,432	+		PFLU_RS13040	0.50	+1.0
2,947,432	+		PFLU_RS13040	0.50	+1.3
2,947,433	-		PFLU_RS13040	0.50	-0.4
2,947,433	-		PFLU_RS13040	0.50	-2.7
2,947,433	-		PFLU_RS13040	0.50	-3.2
2,947,482	+		PFLU_RS13040	0.52	+1.2
2,947,576	+		PFLU_RS13040	0.54	+1.6
2,947,576	+		PFLU_RS13040	0.54	-1.7
2,947,576	+		PFLU_RS13040	0.54	-3.0
2,947,576	+		PFLU_RS13040	0.54	-0.0
2,947,576	+		PFLU_RS13040	0.54	-2.1
2,947,576	+		PFLU_RS13040	0.54	-2.2
2,947,576	+		PFLU_RS13040	0.54	+0.6
2,947,576	+		PFLU_RS13040	0.54	-0.2
2,947,576	+		PFLU_RS13040	0.54	-2.0
2,947,576	+		PFLU_RS13040	0.54	-2.2
2,947,576	+		PFLU_RS13040	0.54	-0.7
2,947,576	+		PFLU_RS13040	0.54	-2.1
2,947,576	+		PFLU_RS13040	0.54	+2.0
2,947,576	+		PFLU_RS13040	0.54	+0.7
2,947,577	-		PFLU_RS13040	0.54	+1.1
2,947,577	-		PFLU_RS13040	0.54	+2.4
2,947,577	-		PFLU_RS13040	0.54	+1.3
2,947,577	-		PFLU_RS13040	0.54	-0.7
2,947,577	-		PFLU_RS13040	0.54	+0.8
2,947,577	-		PFLU_RS13040	0.54	-2.4
2,947,577	-		PFLU_RS13040	0.54	-0.2
2,947,577	-		PFLU_RS13040	0.54	-1.7
2,947,577	-		PFLU_RS13040	0.54	-1.2
2,947,577	-		PFLU_RS13040	0.54	-1.2
2,947,577	-		PFLU_RS13040	0.54	-1.2
2,947,577	-		PFLU_RS13040	0.54	-1.0
2,948,269	-		PFLU_RS13040	0.73	+0.2
2,948,502	+		PFLU_RS13040	0.79	-0.2
2,948,503	-		PFLU_RS13040	0.79	+1.3
2,948,503	-		PFLU_RS13040	0.79	-1.7
2,948,624	-		PFLU_RS13040	0.82	+0.3
2,948,692	+		PFLU_RS13040	0.84	-1.5
2,948,692	+		PFLU_RS13040	0.84	-1.2
2,948,693	-		PFLU_RS13040	0.84	+1.3
2,948,710	+		PFLU_RS13040	0.84	-2.6
2,948,717	-		PFLU_RS13040	0.84	-1.2
2,948,717	-		PFLU_RS13040	0.84	-1.8
2,948,836	+		PFLU_RS13040	0.88	-0.2
2,948,836	+		PFLU_RS13040	0.88	+2.3
2,948,836	+		PFLU_RS13040	0.88	-2.0
2,948,836	+		PFLU_RS13040	0.88	+0.3
2,948,836	+		PFLU_RS13040	0.88	-2.0
2,948,836	+		PFLU_RS13040	0.88	+0.8
2,948,836	+		PFLU_RS13040	0.88	-2.2
2,948,836	+		PFLU_RS13040	0.88	-0.2
2,948,836	+		PFLU_RS13040	0.88	-0.2
2,948,837	-		PFLU_RS13040	0.88	-2.0
2,948,837	-		PFLU_RS13040	0.88	+0.9
2,948,837	-		PFLU_RS13040	0.88	-2.1
2,948,837	-		PFLU_RS13040	0.88	-0.2
2,948,837	-		PFLU_RS13040	0.88	-1.0
2,948,837	-		PFLU_RS13040	0.88	+0.8
2,948,837	-		PFLU_RS13040	0.88	-0.7
2,948,837	-		PFLU_RS13040	0.88	+1.2
2,948,902	+		PFLU_RS13040	0.89	-2.0
2,948,902	+		PFLU_RS13040	0.89	-2.6
2,948,902	+		PFLU_RS13040	0.89	-2.0
2,948,903	-		PFLU_RS13040	0.89	-2.0
2,948,903	-		PFLU_RS13040	0.89	-1.2
2,948,903	-		PFLU_RS13040	0.89	-1.0
2,948,943	+				-2.4
2,949,025	+				-2.0
2,949,025	+				+1.3
2,949,025	+				+0.3
2,949,025	+				+0.3
2,949,025	+				-1.1
2,949,025	+				-0.2
2,949,025	+				+1.0
2,949,026	-				-2.1
2,949,026	-				-1.7
2,949,026	-				-2.6
2,949,026	-				-1.7
2,949,027	+				-2.1
2,949,027	+				-1.2
2,949,028	-				-2.2
2,949,028	-				+0.7
2,949,028	-				-1.5
2,949,084	+				-1.8
2,949,109	+				-1.2
2,949,110	-				-1.8
2,949,110	-				-0.7
2,949,130	+				+1.6
2,949,131	-				-2.2
2,949,131	-				-2.2
2,949,131	-				-2.2
2,949,131	-				+1.3
2,949,131	-				-1.5
2,949,131	-				+1.3
2,949,192	+				-2.7
2,949,250	+				-1.2
2,949,282	+				-3.1
2,949,282	+				+0.5
2,949,284	+				+2.3
2,949,284	+				-3.1
2,949,284	+				-0.7
2,949,284	+				+2.6
2,949,284	+				+1.3
2,949,284	+				-3.1
2,949,284	+				-1.5
2,949,285	-				-0.7
2,949,285	-				-1.5
2,949,285	-				-1.0
2,949,285	-				+1.3
2,949,285	-				-2.8
2,949,285	-				-1.5
2,949,285	-				-0.2
2,949,285	-				-1.0
2,949,298	+				+1.3
2,949,298	+				+4.8
2,949,298	+				+0.8
2,949,298	+				-1.7
2,949,298	+				-1.5
2,949,298	+				-0.1
2,949,299	-				-1.7
2,949,299	-				-1.2
2,949,299	-				-1.2
2,949,299	-				-1.7
2,949,299	-				+0.9
2,949,299	-				-2.1
2,949,305	+				-1.7
2,949,305	+				-1.2
2,949,305	+				+0.8
2,949,305	+				+3.2
2,949,305	+				+2.7
2,949,305	+				+0.8
2,949,305	+				+2.6
2,949,306	-				-3.2
2,949,306	-				-2.8
2,949,306	-				-3.3
2,949,388	+				-1.5
2,949,388	+				+2.0
2,949,388	+				-2.6
2,949,388	+				-0.0
2,949,388	+				-1.5
2,949,388	+				+0.3
2,949,389	-				-2.1
2,949,389	-				+1.1
2,949,389	-				-1.1
2,949,389	-				-2.0
2,949,389	-				+0.3
2,949,389	-				+1.6
2,949,390	+				-2.1
2,949,390	+				+1.8
2,949,390	+				-2.5
2,949,391	-				-2.8
2,949,391	-				+1.6
2,949,391	-				+1.9
2,949,400	+				-0.5
2,949,401	-				+1.1
2,949,503	+				+1.0
2,949,526	-				-1.0
2,949,526	-				+0.4
2,949,526	-				+0.6
2,949,823	+		PFLU_RS13045	0.31	-1.1
2,949,823	+		PFLU_RS13045	0.31	+1.0
2,949,823	+		PFLU_RS13045	0.31	-1.2
2,949,823	+		PFLU_RS13045	0.31	-1.5
2,949,823	+		PFLU_RS13045	0.31	-0.2
2,949,823	+		PFLU_RS13045	0.31	+2.1
2,949,823	+		PFLU_RS13045	0.31	-2.1
2,949,823	+		PFLU_RS13045	0.31	-0.2
2,949,823	+		PFLU_RS13045	0.31	+1.2
2,949,823	+		PFLU_RS13045	0.31	+0.3
2,949,824	-		PFLU_RS13045	0.31	+0.5
2,949,824	-		PFLU_RS13045	0.31	-2.4
2,949,824	-		PFLU_RS13045	0.31	-1.8
2,949,824	-		PFLU_RS13045	0.31	-0.0
2,949,824	-		PFLU_RS13045	0.31	-0.7
2,949,824	-		PFLU_RS13045	0.31	-1.0
2,949,824	-		PFLU_RS13045	0.31	-2.4
2,949,824	-		PFLU_RS13045	0.31	-2.4
2,949,824	-		PFLU_RS13045	0.31	-1.8
2,949,824	-		PFLU_RS13045	0.31	-1.2
2,949,824	-		PFLU_RS13045	0.31	-0.7
2,950,146	+		PFLU_RS13045	0.63	-1.0
2,950,146	+		PFLU_RS13045	0.63	-0.7
2,950,147	-		PFLU_RS13045	0.63	-1.2
2,950,147	-		PFLU_RS13045	0.63	-3.0