Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02575

Experiment: PYE with A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with A22 0.005 mg/ml
2,726,224	-		CCNA_02573	0.50	+0.2
2,726,252	+		CCNA_02573	0.54	+0.4
2,726,301	+		CCNA_02573	0.61	+1.0
2,726,338	+		CCNA_02573	0.66	+1.5
2,726,345	-		CCNA_02573	0.67	+1.9
2,726,364	+		CCNA_02573	0.69	-0.1
2,726,364	+		CCNA_02573	0.69	+0.0
2,726,372	-		CCNA_02573	0.70	+1.1
2,726,372	-		CCNA_02573	0.70	-0.1
2,726,372	-		CCNA_02573	0.70	-1.3
2,726,378	-		CCNA_02573	0.71	-0.4
2,726,419	+		CCNA_02573	0.76	+0.2
2,726,419	+		CCNA_02573	0.76	+1.0
2,726,419	+		CCNA_02573	0.76	+0.1
2,726,427	-		CCNA_02573	0.78	+0.5
2,726,434	+		CCNA_02573	0.78	-0.2
2,726,434	+		CCNA_02573	0.78	+0.2
2,726,434	+		CCNA_02573	0.78	+0.7
2,726,442	-		CCNA_02573	0.80	+0.1
2,726,472	+		CCNA_02573	0.84	+0.1
2,726,479	-		CCNA_02573	0.85	-0.5
2,726,482	+		CCNA_02573	0.85	-1.2
2,726,482	+		CCNA_02573	0.85	+0.2
2,726,490	-		CCNA_02573	0.86	-0.1
2,726,490	-		CCNA_02573	0.86	-0.4
2,726,516	+		CCNA_02573	0.90	+0.9
2,726,553	+				+1.3
2,726,592	+				+0.4
2,726,627	-				-0.4
2,726,651	+		CCNA_02574	0.12	-1.1
2,726,676	+		CCNA_02574	0.17	-0.9
2,726,681	+		CCNA_02574	0.18	-2.0
2,726,681	+		CCNA_02574	0.18	+0.7
2,726,681	+		CCNA_02574	0.18	+0.5
2,726,681	+		CCNA_02574	0.18	-0.1
2,726,681	+		CCNA_02574	0.18	+0.9
2,726,681	+		CCNA_02574	0.18	+0.2
2,726,742	+		CCNA_02574	0.28	-0.9
2,726,771	+		CCNA_02574	0.33	-0.1
2,726,818	-		CCNA_02574	0.41	-0.1
2,726,835	-		CCNA_02574	0.44	+0.5
2,726,874	-		CCNA_02574	0.51	-1.9
2,726,932	-		CCNA_02574	0.61	+0.5
2,726,969	+		CCNA_02574	0.68	+0.9
2,726,969	+		CCNA_02574	0.68	+0.8
2,726,969	+		CCNA_02574	0.68	+0.8
2,726,970	-		CCNA_02574	0.68	+0.9
2,726,970	-		CCNA_02574	0.68	+1.1
2,726,977	-		CCNA_02574	0.69	-0.4
2,726,977	-		CCNA_02574	0.69	-0.5
2,726,982	+		CCNA_02574	0.70	+0.3
2,726,984	+		CCNA_02574	0.70	+0.4
2,726,985	-		CCNA_02574	0.70	-0.2
2,727,000	-		CCNA_02574	0.73	+1.5
2,727,061	+		CCNA_02574	0.84	+0.4
2,727,071	+		CCNA_02574	0.85	+1.1
2,727,097	-		CCNA_02574	0.90	+0.2
2,727,194	+				-1.8
2,727,197	-				+1.1
2,727,197	-				+1.8
2,727,197	-				+1.5
2,727,202	-				+1.1
2,727,224	+				+2.2
2,727,224	+				+0.5
2,727,224	+				-0.1
2,727,227	-				+2.0
2,727,232	-				+1.6
2,727,232	-				+2.3
2,727,232	-				+1.9
2,727,232	-				+1.6
2,727,232	-				+2.7
2,727,232	-				+1.9
2,727,249	-		CCNA_02575	0.10	+4.3
2,727,282	-		CCNA_02575	0.21	+4.0
2,727,305	+		CCNA_02575	0.28	+1.5
2,727,315	-		CCNA_02575	0.31	+4.1
2,727,316	+		CCNA_02575	0.31	-0.9
2,727,324	-		CCNA_02575	0.34	+3.7
2,727,344	+		CCNA_02575	0.40	+0.1
2,727,400	+		CCNA_02575	0.58	-2.5
2,727,408	-		CCNA_02575	0.61	+3.9
2,727,473	+		CCNA_02575	0.81	+0.9
2,727,513	-				+3.9
2,727,655	-				+2.2
2,727,667	+				-0.9
2,727,729	+				+0.6
2,727,756	-				+1.8
2,727,808	+				+1.3
2,727,808	+				+1.9
2,727,808	+				+0.7
2,727,815	+				+1.6
2,727,832	+				+1.6
2,727,832	+				+1.0
2,727,868	+				+0.7
2,727,868	+				+0.6
2,727,873	+				+0.9
2,727,953	+				+0.9
2,727,953	+				+1.1
2,727,973	+				+1.3
2,727,982	+				+1.2
2,728,020	+		CCNA_02576	0.13	+1.2
2,728,034	+		CCNA_02576	0.15	+1.1
2,728,042	-		CCNA_02576	0.16	-1.9
2,728,042	-		CCNA_02576	0.16	+0.5
2,728,047	+		CCNA_02576	0.17	+2.0
2,728,088	+		CCNA_02576	0.22	+1.6
2,728,088	+		CCNA_02576	0.22	+1.4
2,728,088	+		CCNA_02576	0.22	+1.3
2,728,088	+		CCNA_02576	0.22	+1.4
2,728,096	-		CCNA_02576	0.23	-0.7
2,728,160	+		CCNA_02576	0.32	+1.1
2,728,160	+		CCNA_02576	0.32	+0.8
2,728,168	-		CCNA_02576	0.33	+0.9
2,728,170	+		CCNA_02576	0.33	+1.9
2,728,197	+		CCNA_02576	0.37	+1.3
2,728,210	+				+3.8
2,728,215	+		CCNA_02576	0.39	+0.8
2,728,215	+		CCNA_02576	0.39	+0.7
2,728,236	+		CCNA_02576	0.42	+1.2
2,728,249	-		CCNA_02576	0.44	-1.0
2,728,271	+		CCNA_02576	0.47	+2.8
2,728,277	-		CCNA_02576	0.47	-1.3
2,728,298	+		CCNA_02576	0.50	+1.7
2,728,327	+		CCNA_02576	0.54	+0.9
2,728,340	+		CCNA_02576	0.56	+1.3
2,728,359	-		CCNA_02576	0.58	-1.3
2,728,376	+		CCNA_02576	0.60	+0.9
2,728,429	+		CCNA_02576	0.67	+1.3
2,728,437	-		CCNA_02576	0.68	+0.1
2,728,451	+		CCNA_02576	0.70	+1.7
2,728,453	-		CCNA_02576	0.70	-0.5
2,728,453	-		CCNA_02576	0.70	-1.1
2,728,465	-		CCNA_02576	0.72	+0.5
2,728,489	+		CCNA_02576	0.75	+1.1
2,728,503	+		CCNA_02576	0.77	+1.0
2,728,512	+		CCNA_02576	0.78	+1.2