Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2840
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,587,718 | - | -0.4 | |||
3,587,881 | + | +0.7 | |||
3,587,998 | - | DvMF_2840 | 0.11 | -1.0 | |
3,588,096 | + | DvMF_2840 | 0.19 | -1.5 | |
3,588,133 | + | DvMF_2840 | 0.22 | -0.2 | |
3,588,204 | - | DvMF_2840 | 0.28 | -1.1 | |
3,588,250 | + | DvMF_2840 | 0.32 | -0.0 | |
3,588,258 | - | DvMF_2840 | 0.33 | -3.5 | |
3,588,422 | + | DvMF_2840 | 0.46 | -0.7 | |
3,588,471 | + | DvMF_2840 | 0.50 | -1.2 | |
3,588,509 | - | DvMF_2840 | 0.53 | -3.1 | |
3,588,509 | - | DvMF_2840 | 0.53 | -1.2 | |
3,588,833 | - | DvMF_2840 | 0.80 | -0.8 | |
3,589,344 | - | -1.0 | |||
3,589,506 | - | -0.2 | |||
3,589,698 | + | DvMF_2841 | 0.29 | -1.4 | |
3,589,717 | + | DvMF_2841 | 0.33 | -0.2 | |
3,589,817 | - | DvMF_2841 | 0.56 | +0.3 | |
3,589,820 | - | DvMF_2841 | 0.57 | +0.2 |
Or see this region's nucleotide sequence