Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2672
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,374,067 | - | DvMF_2671 | 0.57 | -0.1 | |
3,374,110 | + | DvMF_2671 | 0.59 | -0.9 | |
3,374,110 | + | DvMF_2671 | 0.59 | -4.0 | |
3,374,110 | - | DvMF_2671 | 0.59 | -1.6 | |
3,374,192 | + | DvMF_2671 | 0.64 | -0.9 | |
3,374,200 | - | DvMF_2671 | 0.64 | -1.7 | |
3,374,200 | - | DvMF_2671 | 0.64 | -1.6 | |
3,374,212 | - | DvMF_2671 | 0.65 | -1.0 | |
3,374,222 | - | DvMF_2671 | 0.65 | -3.6 | |
3,374,246 | + | DvMF_2671 | 0.67 | -0.4 | |
3,374,246 | + | DvMF_2671 | 0.67 | -1.1 | |
3,374,254 | - | DvMF_2671 | 0.67 | -0.8 | |
3,374,337 | - | DvMF_2671 | 0.72 | -0.8 | |
3,374,376 | + | DvMF_2671 | 0.74 | -0.7 | |
3,374,451 | - | DvMF_2671 | 0.78 | -0.8 | |
3,374,468 | - | DvMF_2671 | 0.79 | -0.8 | |
3,374,481 | + | DvMF_2671 | 0.80 | -0.7 | |
3,374,637 | - | DvMF_2671 | 0.88 | -0.3 | |
3,374,734 | + | -0.5 | |||
3,375,228 | + | DvMF_2672 | 0.72 | -1.4 | |
3,375,450 | + | -0.3 | |||
3,375,465 | + | -0.2 | |||
3,375,497 | - | -0.7 | |||
3,375,533 | - | +0.1 | |||
3,375,610 | - | DvMF_2673 | 0.11 | +0.1 | |
3,375,629 | - | DvMF_2673 | 0.13 | -1.3 | |
3,376,237 | + | DvMF_2673 | 0.56 | +1.1 |
Or see this region's nucleotide sequence