Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2365
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,984,980 | - | -1.1 | |||
2,985,052 | + | -0.5 | |||
2,985,057 | + | -1.3 | |||
2,985,082 | + | -2.7 | |||
2,985,095 | - | -0.2 | |||
2,985,105 | - | +1.1 | |||
2,985,189 | + | +1.4 | |||
2,985,197 | - | -1.3 | |||
2,985,645 | + | -2.4 | |||
2,985,645 | + | -3.9 | |||
2,985,658 | - | -2.9 | |||
2,985,658 | - | -4.9 | |||
2,986,082 | + | DvMF_2365 | 0.36 | -6.4 | |
2,986,090 | - | DvMF_2365 | 0.37 | -2.9 | |
2,986,134 | - | DvMF_2365 | 0.40 | -3.8 | |
2,986,259 | - | DvMF_2365 | 0.48 | -2.3 | |
2,986,285 | - | DvMF_2365 | 0.50 | -4.8 | |
2,986,566 | - | DvMF_2365 | 0.70 | -5.4 | |
2,986,646 | + | DvMF_2365 | 0.75 | -4.2 | |
2,986,665 | - | DvMF_2365 | 0.76 | -2.1 | |
2,986,739 | + | DvMF_2365 | 0.82 | -5.4 | |
2,986,863 | - | -2.9 | |||
2,986,913 | + | -3.2 | |||
2,986,999 | + | -1.0 | |||
2,987,032 | - | +0.9 | |||
2,987,124 | + | -0.7 | |||
2,987,350 | - | DvMF_2366 | 0.33 | -0.5 | |
2,987,639 | - | -0.9 | |||
2,987,670 | - | -0.4 | |||
2,987,715 | + | +0.6 | |||
2,987,762 | + | -1.0 |
Or see this region's nucleotide sequence