Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2329
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,935,554 | + | DvMF_2328 | 0.81 | -0.3 | |
2,935,555 | - | DvMF_2328 | 0.81 | -2.2 | |
2,935,657 | - | DvMF_2328 | 0.85 | -1.5 | |
2,935,703 | - | DvMF_2328 | 0.87 | -0.3 | |
2,935,905 | - | -0.6 | |||
2,935,947 | + | -3.5 | |||
2,935,984 | - | -0.7 | |||
2,936,138 | + | -0.8 | |||
2,936,194 | - | -0.8 | |||
2,936,259 | - | -1.1 | |||
2,936,261 | + | -0.0 | |||
2,936,271 | - | -0.2 | |||
2,936,464 | - | -1.0 | |||
2,936,728 | + | DvMF_2329 | 0.17 | -0.6 | |
2,936,728 | + | DvMF_2329 | 0.17 | -3.2 | |
2,936,754 | + | DvMF_2329 | 0.20 | -0.8 | |
2,936,899 | - | DvMF_2329 | 0.34 | -1.7 | |
2,937,056 | + | DvMF_2329 | 0.49 | -0.6 | |
2,937,061 | + | DvMF_2329 | 0.49 | -1.5 | |
2,937,323 | + | DvMF_2329 | 0.75 | -0.7 | |
2,937,429 | - | DvMF_2329 | 0.85 | -0.7 | |
2,937,772 | + | DvMF_2330 | 0.13 | -1.1 | |
2,938,047 | - | DvMF_2330 | 0.42 | +0.5 | |
2,938,284 | - | DvMF_2330 | 0.67 | -0.7 | |
2,938,379 | - | DvMF_2330 | 0.78 | -1.1 |
Or see this region's nucleotide sequence