Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2203
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,756,924 | + | -1.5 | |||
| 2,756,924 | + | -1.2 | |||
| 2,757,132 | + | DvMF_2203 | 0.70 | -0.9 | |
| 2,757,152 | - | DvMF_2203 | 0.77 | +0.9 | |
| 2,757,263 | - | -1.9 | |||
| 2,757,439 | + | -0.4 | |||
| 2,757,530 | + | DvMF_2204 | 0.10 | +0.3 | |
| 2,757,533 | - | DvMF_2204 | 0.11 | +0.8 | |
| 2,757,582 | - | DvMF_2204 | 0.15 | +1.6 | |
| 2,757,582 | - | DvMF_2204 | 0.15 | +0.6 | |
| 2,757,618 | - | DvMF_2204 | 0.18 | +0.9 | |
| 2,757,646 | - | DvMF_2204 | 0.20 | +0.2 | |
| 2,757,830 | - | DvMF_2204 | 0.36 | +1.4 | |
| 2,757,833 | + | DvMF_2204 | 0.36 | +2.7 | |
| 2,757,866 | + | DvMF_2204 | 0.39 | -0.9 | |
| 2,757,866 | + | DvMF_2204 | 0.39 | +3.9 | |
| 2,757,866 | + | DvMF_2204 | 0.39 | +0.8 | |
| 2,757,867 | + | DvMF_2204 | 0.39 | +0.4 | |
| 2,757,875 | - | DvMF_2204 | 0.40 | +0.9 | |
| 2,758,134 | + | DvMF_2204 | 0.62 | +0.3 |
Or see this region's nucleotide sequence