Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2193
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,738,096 | - | DvMF_2192 | 0.33 | -0.6 | |
2,738,142 | + | DvMF_2192 | 0.37 | -2.9 | |
2,738,289 | + | DvMF_2192 | 0.50 | -0.6 | |
2,738,316 | + | DvMF_2192 | 0.53 | -4.4 | |
2,738,524 | + | DvMF_2192 | 0.71 | -1.3 | |
2,738,656 | + | DvMF_2192 | 0.82 | -1.0 | |
2,738,675 | - | DvMF_2192 | 0.84 | -0.3 | |
2,738,680 | - | DvMF_2192 | 0.85 | -0.3 | |
2,738,856 | + | -2.5 | |||
2,739,135 | - | DvMF_2193 | 0.23 | -1.9 | |
2,739,254 | - | DvMF_2193 | 0.39 | -0.4 | |
2,739,369 | + | DvMF_2193 | 0.53 | -1.8 | |
2,739,377 | - | DvMF_2193 | 0.54 | -0.5 | |
2,739,421 | + | DvMF_2193 | 0.60 | -3.1 | |
2,739,509 | + | DvMF_2193 | 0.71 | -2.7 | |
2,739,517 | - | DvMF_2193 | 0.72 | -0.2 | |
2,739,517 | - | DvMF_2193 | 0.72 | +0.2 | |
2,739,537 | + | DvMF_2193 | 0.75 | -0.3 | |
2,739,579 | - | DvMF_2193 | 0.80 | +0.0 | |
2,739,587 | - | DvMF_2193 | 0.81 | -1.1 | |
2,739,606 | - | DvMF_2193 | 0.84 | -0.6 | |
2,739,738 | + | -1.3 | |||
2,739,898 | + | -0.3 | |||
2,739,898 | + | -0.0 | |||
2,739,906 | - | -0.2 | |||
2,739,906 | - | -1.2 | |||
2,740,391 | - | +0.0 | |||
2,740,426 | - | -0.7 | |||
2,740,477 | - | -2.0 | |||
2,740,610 | + | +0.2 |
Or see this region's nucleotide sequence