Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2008
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,487,539 | + | -1.1 | |||
2,487,581 | + | DvMF_2007 | 0.16 | -0.9 | |
2,487,589 | - | DvMF_2007 | 0.18 | -1.0 | |
2,487,683 | - | DvMF_2007 | 0.40 | -0.5 | |
2,487,695 | + | DvMF_2007 | 0.43 | +0.1 | |
2,487,707 | + | DvMF_2007 | 0.46 | -0.3 | |
2,487,820 | + | DvMF_2007 | 0.73 | -0.3 | |
2,487,828 | - | DvMF_2007 | 0.75 | -0.2 | |
2,487,833 | + | DvMF_2007 | 0.76 | -0.5 | |
2,487,965 | + | +0.5 | |||
2,488,002 | - | -0.6 | |||
2,488,152 | + | DvMF_2008 | 0.45 | -0.9 | |
2,488,460 | + | -1.5 | |||
2,488,480 | - | -0.6 | |||
2,488,679 | - | DvMF_2009 | 0.17 | +0.7 | |
2,488,689 | + | DvMF_2009 | 0.18 | +0.4 | |
2,488,806 | + | DvMF_2009 | 0.33 | +0.9 | |
2,488,819 | - | DvMF_2009 | 0.35 | +0.5 | |
2,488,860 | - | DvMF_2009 | 0.40 | +0.7 | |
2,488,910 | - | DvMF_2009 | 0.46 | +0.4 | |
2,489,098 | - | DvMF_2009 | 0.70 | +0.4 | |
2,489,105 | - | DvMF_2009 | 0.71 | +0.1 | |
2,489,317 | + | -0.8 |
Or see this region's nucleotide sequence