Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1548
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,910,574 | - | DvMF_1547 | 0.72 | +0.3 | |
| 1,910,803 | + | DvMF_1547 | 0.85 | +0.6 | |
| 1,910,842 | - | DvMF_1547 | 0.87 | -1.3 | |
| 1,910,927 | + | +0.3 | |||
| 1,910,927 | + | +0.2 | |||
| 1,911,047 | + | +0.4 | |||
| 1,911,064 | + | -0.8 | |||
| 1,911,076 | + | -0.5 | |||
| 1,911,230 | - | -0.5 | |||
| 1,911,267 | - | +0.6 | |||
| 1,911,297 | + | +0.1 | |||
| 1,911,406 | + | DvMF_1548 | 0.13 | -3.3 | |
| 1,911,691 | - | DvMF_1548 | 0.50 | -2.8 | |
| 1,911,691 | - | DvMF_1548 | 0.50 | -2.9 | |
| 1,911,890 | + | DvMF_1548 | 0.75 | -2.8 | |
| 1,912,055 | - | -1.4 | |||
| 1,912,179 | - | -1.1 | |||
| 1,912,246 | - | -0.2 | |||
| 1,912,490 | - | -0.7 | |||
| 1,912,804 | - | DvMF_1549 | 0.13 | -0.2 |
Or see this region's nucleotide sequence