Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1301 and DvMF_1302 are separated by 541 nucleotides DvMF_1302 and DvMF_1303 overlap by 23 nucleotides DvMF_1303 and DvMF_1304 are separated by 0 nucleotides DvMF_1304 and DvMF_1305 overlap by 4 nucleotides
DvMF_1301: DvMF_1301 - baseplate assembly protein, putative (RefSeq), at 1,590,736 to 1,591,461
_1301
DvMF_1302: DvMF_1302 - baseplate assembly protein, putative (RefSeq), at 1,592,003 to 1,592,437
_1302
DvMF_1303: DvMF_1303 - baseplate assembly protein, putative (RefSeq), at 1,592,415 to 1,593,587
_1303
DvMF_1304: DvMF_1304 - hypothetical protein (RefSeq), at 1,593,588 to 1,594,259
_1304
DvMF_1305: DvMF_1305 - tail fiber protein, putative (RefSeq), at 1,594,256 to 1,595,773
_1305
Position (kb)
1592
1593
1594 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1591.571 kb on - strand at 1592.161 kb on + strand, within DvMF_1302 at 1592.203 kb on + strand, within DvMF_1302 at 1592.261 kb on - strand, within DvMF_1302 at 1592.302 kb on - strand, within DvMF_1302 at 1592.318 kb on + strand, within DvMF_1302 at 1592.375 kb on - strand, within DvMF_1302 at 1592.453 kb on - strand at 1592.474 kb on + strand at 1592.492 kb on - strand at 1592.515 kb on - strand at 1592.727 kb on - strand, within DvMF_1303 at 1593.090 kb on + strand, within DvMF_1303 at 1593.132 kb on - strand, within DvMF_1303 at 1593.147 kb on - strand, within DvMF_1303 at 1593.346 kb on + strand, within DvMF_1303 at 1593.383 kb on + strand, within DvMF_1303 at 1593.383 kb on + strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.526 kb on + strand at 1593.548 kb on - strand at 1593.892 kb on + strand, within DvMF_1304 at 1593.954 kb on - strand, within DvMF_1304 at 1594.239 kb on - strand at 1594.466 kb on + strand, within DvMF_1305 at 1594.568 kb on - strand, within DvMF_1305
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Rifampicin 0.2 mg/ml remove 1,591,571 - -0.1 1,592,161 + DvMF_1302 0.36 -2.2 1,592,203 + DvMF_1302 0.46 -0.8 1,592,261 - DvMF_1302 0.59 -0.2 1,592,302 - DvMF_1302 0.69 +0.6 1,592,318 + DvMF_1302 0.72 -0.8 1,592,375 - DvMF_1302 0.86 -1.7 1,592,453 - -0.9 1,592,474 + -0.6 1,592,492 - -0.7 1,592,515 - -1.0 1,592,727 - DvMF_1303 0.27 -1.1 1,593,090 + DvMF_1303 0.58 -1.1 1,593,132 - DvMF_1303 0.61 -0.2 1,593,147 - DvMF_1303 0.62 -0.9 1,593,346 + DvMF_1303 0.79 -1.8 1,593,383 + DvMF_1303 0.83 -1.5 1,593,383 + DvMF_1303 0.83 -1.3 1,593,391 - DvMF_1303 0.83 -1.1 1,593,391 - DvMF_1303 0.83 -3.0 1,593,391 - DvMF_1303 0.83 -0.6 1,593,391 - DvMF_1303 0.83 -0.9 1,593,526 + -0.7 1,593,548 - -0.5 1,593,892 + DvMF_1304 0.45 -0.9 1,593,954 - DvMF_1304 0.54 -0.6 1,594,239 - -1.6 1,594,466 + DvMF_1305 0.14 -1.1 1,594,568 - DvMF_1305 0.21 -3.5
Or see this region's nucleotide sequence