Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1299
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,588,431 | - | DvMF_1298 | 0.58 | -1.1 | |
1,588,581 | - | DvMF_1298 | 0.65 | -1.6 | |
1,588,777 | - | DvMF_1298 | 0.73 | -0.3 | |
1,588,916 | + | DvMF_1298 | 0.79 | -0.7 | |
1,589,009 | - | DvMF_1298 | 0.83 | -1.2 | |
1,589,131 | - | DvMF_1298 | 0.88 | +0.6 | |
1,589,190 | - | -1.3 | |||
1,589,226 | - | -0.8 | |||
1,589,316 | + | -0.6 | |||
1,589,417 | + | -0.3 | |||
1,589,579 | + | DvMF_1299 | 0.32 | -0.8 | |
1,589,587 | - | DvMF_1299 | 0.34 | -1.9 | |
1,589,622 | + | DvMF_1299 | 0.40 | -0.2 | |
1,589,854 | + | DvMF_1299 | 0.82 | -1.2 | |
1,589,879 | - | DvMF_1299 | 0.87 | -1.0 | |
1,590,058 | + | DvMF_1300 | 0.14 | -0.9 | |
1,590,254 | + | DvMF_1300 | 0.38 | -0.9 | |
1,590,462 | - | DvMF_1300 | 0.64 | -0.6 | |
1,590,507 | + | DvMF_1300 | 0.70 | -3.4 | |
1,590,509 | + | DvMF_1300 | 0.70 | -0.3 | |
1,590,929 | + | DvMF_1301 | 0.27 | -1.2 |
Or see this region's nucleotide sequence