Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1234
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,521,681 | - | DvMF_1233 | 0.50 | -1.2 | |
1,521,751 | - | DvMF_1233 | 0.58 | -0.7 | |
1,521,803 | - | DvMF_1233 | 0.63 | -0.5 | |
1,521,846 | - | DvMF_1233 | 0.68 | +0.5 | |
1,522,071 | + | +0.9 | |||
1,522,242 | + | -0.6 | |||
1,522,252 | - | -0.9 | |||
1,522,366 | + | -0.2 | |||
1,522,451 | + | -1.2 | |||
1,522,478 | - | +0.1 | |||
1,522,478 | - | -0.3 | |||
1,523,062 | - | DvMF_1234 | 0.55 | +0.2 | |
1,523,292 | - | DvMF_1234 | 0.81 | -3.1 | |
1,523,483 | + | -0.1 | |||
1,523,501 | - | -2.5 | |||
1,523,527 | - | +0.0 | |||
1,524,021 | - | DvMF_1236 | 0.10 | +0.0 | |
1,524,035 | + | DvMF_1236 | 0.12 | -0.5 |
Or see this region's nucleotide sequence