Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0930 and DvMF_0931 are separated by 153 nucleotides DvMF_0931 and DvMF_0932 are separated by 10 nucleotides DvMF_0932 and DvMF_0933 are separated by 2 nucleotides
DvMF_0930: DvMF_0930 - cytoplasmic chaperone TorD family protein (RefSeq), at 1,128,058 to 1,128,780
_0930
DvMF_0931: DvMF_0931 - molybdopterin oxidoreductase (RefSeq), at 1,128,934 to 1,131,165
_0931
DvMF_0932: DvMF_0932 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,131,176 to 1,131,763
_0932
DvMF_0933: DvMF_0933 - molybdopterin-containing oxidoreductase membrane anchor subunit (RefSeq), at 1,131,766 to 1,132,599
_0933
Position (kb)
1128
1129
1130
1131
1132 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1128.023 kb on - strand at 1128.342 kb on - strand, within DvMF_0930 at 1128.490 kb on + strand, within DvMF_0930 at 1128.491 kb on + strand, within DvMF_0930 at 1128.543 kb on + strand, within DvMF_0930 at 1128.622 kb on - strand, within DvMF_0930 at 1128.634 kb on + strand, within DvMF_0930 at 1129.010 kb on + strand at 1129.110 kb on + strand at 1129.125 kb on + strand at 1129.168 kb on + strand, within DvMF_0931 at 1129.240 kb on + strand, within DvMF_0931 at 1129.299 kb on - strand, within DvMF_0931 at 1129.425 kb on + strand, within DvMF_0931 at 1129.575 kb on - strand, within DvMF_0931 at 1129.582 kb on - strand, within DvMF_0931 at 1129.604 kb on - strand, within DvMF_0931 at 1129.668 kb on + strand, within DvMF_0931 at 1129.694 kb on - strand, within DvMF_0931 at 1129.736 kb on + strand, within DvMF_0931 at 1130.546 kb on - strand, within DvMF_0931 at 1130.780 kb on - strand, within DvMF_0931 at 1130.838 kb on + strand, within DvMF_0931 at 1130.919 kb on + strand, within DvMF_0931 at 1130.919 kb on + strand, within DvMF_0931 at 1130.919 kb on + strand, within DvMF_0931 at 1130.933 kb on - strand, within DvMF_0931 at 1130.963 kb on - strand at 1131.019 kb on + strand at 1131.403 kb on + strand, within DvMF_0932 at 1131.404 kb on - strand, within DvMF_0932 at 1131.449 kb on - strand, within DvMF_0932 at 1131.535 kb on - strand, within DvMF_0932 at 1131.646 kb on + strand, within DvMF_0932 at 1131.646 kb on + strand, within DvMF_0932 at 1131.679 kb on - strand, within DvMF_0932 at 1131.756 kb on + strand at 1131.760 kb on - strand at 1131.793 kb on - strand at 1131.835 kb on - strand at 1132.115 kb on + strand, within DvMF_0933
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Rifampicin 0.2 mg/ml remove 1,128,023 - -0.4 1,128,342 - DvMF_0930 0.39 +1.6 1,128,490 + DvMF_0930 0.60 +1.6 1,128,491 + DvMF_0930 0.60 +3.5 1,128,543 + DvMF_0930 0.67 +1.4 1,128,622 - DvMF_0930 0.78 +1.7 1,128,634 + DvMF_0930 0.80 +1.8 1,129,010 + +2.1 1,129,110 + +2.3 1,129,125 + +1.7 1,129,168 + DvMF_0931 0.10 +2.8 1,129,240 + DvMF_0931 0.14 +1.7 1,129,299 - DvMF_0931 0.16 +2.5 1,129,425 + DvMF_0931 0.22 +1.1 1,129,575 - DvMF_0931 0.29 +1.5 1,129,582 - DvMF_0931 0.29 +1.8 1,129,604 - DvMF_0931 0.30 +2.5 1,129,668 + DvMF_0931 0.33 +2.4 1,129,694 - DvMF_0931 0.34 +1.5 1,129,736 + DvMF_0931 0.36 +1.7 1,130,546 - DvMF_0931 0.72 +1.9 1,130,780 - DvMF_0931 0.83 +2.5 1,130,838 + DvMF_0931 0.85 +1.2 1,130,919 + DvMF_0931 0.89 +1.8 1,130,919 + DvMF_0931 0.89 +1.6 1,130,919 + DvMF_0931 0.89 +2.0 1,130,933 - DvMF_0931 0.90 +2.3 1,130,963 - +1.9 1,131,019 + +1.6 1,131,403 + DvMF_0932 0.39 +2.4 1,131,404 - DvMF_0932 0.39 +2.1 1,131,449 - DvMF_0932 0.46 +1.1 1,131,535 - DvMF_0932 0.61 +1.6 1,131,646 + DvMF_0932 0.80 +2.0 1,131,646 + DvMF_0932 0.80 +2.6 1,131,679 - DvMF_0932 0.86 +3.1 1,131,756 + +1.7 1,131,760 - +1.0 1,131,793 - +1.5 1,131,835 - +1.3 1,132,115 + DvMF_0933 0.42 +0.6
Or see this region's nucleotide sequence