Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0892
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,075,453 | + | -1.7 | |||
1,075,643 | + | -0.9 | |||
1,075,920 | + | DvMF_0892 | 0.28 | -1.3 | |
1,075,923 | - | DvMF_0892 | 0.28 | -0.5 | |
1,075,923 | - | DvMF_0892 | 0.28 | -1.3 | |
1,075,928 | - | DvMF_0892 | 0.29 | -0.5 | |
1,075,953 | - | DvMF_0892 | 0.31 | -0.5 | |
1,076,451 | - | DvMF_0892 | 0.80 | -0.8 | |
1,076,529 | - | DvMF_0892 | 0.87 | -1.5 | |
1,076,543 | + | DvMF_0892 | 0.89 | -0.3 | |
1,076,660 | + | -0.5 | |||
1,076,683 | - | -0.6 | |||
1,076,706 | - | +0.2 | |||
1,076,706 | - | -0.4 | |||
1,076,934 | + | DvMF_0893 | 0.15 | -0.3 | |
1,076,934 | + | DvMF_0893 | 0.15 | -1.2 | |
1,076,960 | + | DvMF_0893 | 0.20 | -1.4 | |
1,076,982 | - | DvMF_0893 | 0.23 | -1.1 | |
1,076,992 | - | DvMF_0893 | 0.25 | -0.7 | |
1,077,168 | + | DvMF_0893 | 0.52 | -0.8 | |
1,077,247 | - | DvMF_0893 | 0.65 | -1.7 | |
1,077,487 | + | +0.8 | |||
1,077,601 | + | -0.6 |
Or see this region's nucleotide sequence