Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0874
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,052,995 | + | -0.4 | |||
| 1,053,027 | + | -0.9 | |||
| 1,053,275 | + | DvMF_0873 | 0.34 | -1.9 | |
| 1,053,327 | + | DvMF_0873 | 0.46 | -1.1 | |
| 1,053,364 | - | DvMF_0873 | 0.54 | -0.1 | |
| 1,053,410 | - | DvMF_0873 | 0.65 | -0.3 | |
| 1,053,425 | + | DvMF_0873 | 0.68 | -1.0 | |
| 1,053,906 | - | +1.1 | |||
| 1,054,552 | - | DvMF_0874 | 0.51 | +1.4 | |
| 1,054,558 | + | DvMF_0874 | 0.51 | +1.3 | |
| 1,054,630 | + | DvMF_0874 | 0.57 | +1.7 | |
| 1,054,630 | + | DvMF_0874 | 0.57 | -0.6 | |
| 1,054,630 | + | DvMF_0874 | 0.57 | +1.4 | |
| 1,054,630 | + | DvMF_0874 | 0.57 | +1.3 | |
| 1,054,630 | + | DvMF_0874 | 0.57 | +0.3 | |
| 1,054,638 | - | DvMF_0874 | 0.57 | +1.4 | |
| 1,054,638 | - | DvMF_0874 | 0.57 | +0.8 | |
| 1,054,893 | + | DvMF_0874 | 0.76 | +0.2 | |
| 1,054,954 | - | DvMF_0874 | 0.80 | +0.9 | |
| 1,055,658 | + | DvMF_0875 | 0.12 | -0.7 | |
| 1,055,694 | - | DvMF_0875 | 0.15 | -1.1 | |
| 1,055,713 | + | DvMF_0875 | 0.17 | -0.4 | |
| 1,055,788 | - | DvMF_0875 | 0.23 | -1.5 | |
| 1,056,005 | + | DvMF_0875 | 0.43 | -2.3 |
Or see this region's nucleotide sequence