Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0331
Experiment: MoYLS4 with Rifampicin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
384,930 | - | DvMF_0330 | 0.22 | -0.4 | |
384,949 | - | DvMF_0330 | 0.23 | -0.5 | |
385,416 | - | DvMF_0330 | 0.64 | -0.5 | |
385,498 | + | DvMF_0330 | 0.71 | -0.6 | |
385,508 | + | DvMF_0330 | 0.72 | -0.8 | |
385,635 | + | DvMF_0330 | 0.83 | -0.9 | |
385,823 | - | -0.8 | |||
386,104 | + | DvMF_0331 | 0.21 | -0.6 | |
386,495 | - | DvMF_0331 | 0.50 | -0.1 | |
386,600 | - | DvMF_0331 | 0.58 | -1.7 | |
386,606 | - | DvMF_0331 | 0.59 | -0.7 | |
386,606 | - | DvMF_0331 | 0.59 | -0.2 | |
386,618 | + | DvMF_0331 | 0.60 | -1.0 | |
386,663 | - | DvMF_0331 | 0.63 | -1.1 | |
386,689 | + | DvMF_0331 | 0.65 | -0.7 | |
386,773 | + | DvMF_0331 | 0.71 | -1.0 | |
386,785 | + | DvMF_0331 | 0.72 | -1.4 | |
386,788 | - | DvMF_0331 | 0.73 | -0.6 | |
386,822 | - | DvMF_0331 | 0.75 | -1.6 | |
386,846 | + | DvMF_0331 | 0.77 | +0.3 | |
386,883 | + | DvMF_0331 | 0.80 | -0.9 | |
387,153 | - | -2.5 | |||
387,299 | + | DvMF_0332 | 0.10 | -0.6 | |
387,433 | - | DvMF_0332 | 0.20 | +0.5 | |
387,505 | - | DvMF_0332 | 0.25 | -1.1 | |
387,616 | - | DvMF_0332 | 0.33 | -0.0 | |
387,695 | - | DvMF_0332 | 0.38 | -0.3 | |
387,798 | + | DvMF_0332 | 0.45 | -0.7 |
Or see this region's nucleotide sequence