Experiment: MoLS4 with L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2245 and DORF16603 are separated by 793 nucleotides DORF16603 and DVU2246 are separated by 89 nucleotides
DVU2245: DVU2245 - mutT/nudix family protein (TIGR), at 2,340,177 to 2,340,593
DVU2245
DORF16603: DORF16603 - SEED: FIG00603945: hypothetical protein, at 2,341,387 to 2,341,623
DORF16603
DVU2246: DVU2246 - S1 RNA binding domain protein (TIGR), at 2,341,713 to 2,343,884
DVU2246
Position (kb)
2341
2342 Strain fitness (log2 ratio)
-1
0
1
2 at 2340.409 kb on - strand, within DVU2245 at 2340.413 kb on + strand, within DVU2245 at 2340.422 kb on - strand, within DVU2245 at 2340.622 kb on + strand at 2340.630 kb on - strand at 2340.638 kb on + strand at 2340.670 kb on - strand at 2340.683 kb on + strand at 2340.726 kb on - strand at 2340.744 kb on + strand at 2340.744 kb on + strand at 2340.752 kb on - strand at 2340.786 kb on + strand at 2340.828 kb on + strand at 2340.839 kb on - strand at 2340.851 kb on + strand at 2340.887 kb on - strand at 2340.939 kb on - strand at 2341.003 kb on - strand at 2341.024 kb on + strand at 2341.044 kb on + strand at 2341.181 kb on - strand at 2341.257 kb on - strand at 2341.270 kb on + strand at 2341.292 kb on - strand at 2341.341 kb on + strand at 2341.349 kb on - strand at 2341.359 kb on - strand at 2341.366 kb on + strand at 2341.385 kb on + strand at 2341.385 kb on + strand at 2341.393 kb on - strand at 2341.422 kb on - strand, within DORF16603 at 2341.658 kb on + strand at 2341.684 kb on + strand at 2341.705 kb on + strand at 2341.784 kb on + strand at 2341.949 kb on + strand, within DVU2246 at 2342.168 kb on + strand, within DVU2246 at 2342.342 kb on - strand, within DVU2246 at 2342.410 kb on - strand, within DVU2246 at 2342.423 kb on + strand, within DVU2246 at 2342.485 kb on + strand, within DVU2246 at 2342.538 kb on + strand, within DVU2246 at 2342.538 kb on + strand, within DVU2246 at 2342.546 kb on - strand, within DVU2246 at 2342.588 kb on + strand, within DVU2246 at 2342.596 kb on - strand, within DVU2246
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Asparagine (N) remove 2,340,409 - DVU2245 0.56 -0.1 2,340,413 + DVU2245 0.57 -0.3 2,340,422 - DVU2245 0.59 -0.3 2,340,622 + -0.3 2,340,630 - +0.1 2,340,638 + -1.3 2,340,670 - -0.5 2,340,683 + -0.8 2,340,726 - +0.1 2,340,744 + -0.6 2,340,744 + -0.2 2,340,752 - +1.5 2,340,786 + -0.7 2,340,828 + +1.8 2,340,839 - -0.1 2,340,851 + -0.3 2,340,887 - +0.8 2,340,939 - -1.3 2,341,003 - -0.1 2,341,024 + -0.2 2,341,044 + +0.2 2,341,181 - -0.6 2,341,257 - +0.4 2,341,270 + -1.0 2,341,292 - -1.3 2,341,341 + -0.6 2,341,349 - -0.6 2,341,359 - -0.2 2,341,366 + +0.4 2,341,385 + -0.6 2,341,385 + -0.9 2,341,393 - +0.4 2,341,422 - DORF16603 0.15 +0.2 2,341,658 + -0.8 2,341,684 + -0.4 2,341,705 + +0.2 2,341,784 + -0.4 2,341,949 + DVU2246 0.11 +0.3 2,342,168 + DVU2246 0.21 +0.2 2,342,342 - DVU2246 0.29 +0.7 2,342,410 - DVU2246 0.32 +0.1 2,342,423 + DVU2246 0.33 +0.1 2,342,485 + DVU2246 0.36 +0.9 2,342,538 + DVU2246 0.38 +0.3 2,342,538 + DVU2246 0.38 -0.6 2,342,546 - DVU2246 0.38 -0.1 2,342,588 + DVU2246 0.40 +0.1 2,342,596 - DVU2246 0.41 +0.0
Or see this region's nucleotide sequence