Experiment: M63_quarter_strength
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS06670 and RS_RS06675 are separated by 19 nucleotides RS_RS06675 and RS_RS06680 are separated by 12 nucleotides RS_RS06680 and RS_RS06685 overlap by 4 nucleotides RS_RS06685 and RS_RS06690 are separated by 157 nucleotides
RS_RS06670: RS_RS06670 - molybdopterin molybdenumtransferase MoeA, at 1,416,037 to 1,417,296
_RS06670
RS_RS06675: RS_RS06675 - molybdopterin converting factor subunit 1, at 1,417,316 to 1,417,573
_RS06675
RS_RS06680: RS_RS06680 - molybdopterin synthase catalytic subunit, at 1,417,586 to 1,418,116
_RS06680
RS_RS06685: RS_RS06685 - fluoride efflux transporter CrcB, at 1,418,113 to 1,418,493
_RS06685
RS_RS06690: RS_RS06690 - D-(-)-3-hydroxybutyrate oligomer hydrolase, at 1,418,651 to 1,420,828
_RS06690
Position (kb)
1417
1418
1419 Strain fitness (log2 ratio)
-2
-1
0
1 at 1416.664 kb on + strand, within RS_RS06670 at 1416.665 kb on - strand, within RS_RS06670 at 1416.745 kb on - strand, within RS_RS06670 at 1417.596 kb on + strand at 1417.596 kb on + strand at 1417.596 kb on + strand at 1417.597 kb on - strand at 1417.597 kb on - strand at 1417.602 kb on + strand at 1417.603 kb on - strand at 1417.746 kb on - strand, within RS_RS06680 at 1418.252 kb on - strand, within RS_RS06685 at 1418.401 kb on + strand, within RS_RS06685 at 1418.557 kb on + strand at 1418.557 kb on + strand at 1418.558 kb on - strand at 1418.566 kb on + strand at 1418.580 kb on + strand at 1418.613 kb on - strand at 1418.963 kb on + strand, within RS_RS06690 at 1418.963 kb on + strand, within RS_RS06690 at 1418.963 kb on + strand, within RS_RS06690 at 1419.008 kb on + strand, within RS_RS06690 at 1419.087 kb on - strand, within RS_RS06690
Per-strain Table
Position Strand Gene LocusTag Fraction M63_quarter_strength remove 1,416,664 + RS_RS06670 0.50 -0.2 1,416,665 - RS_RS06670 0.50 -1.1 1,416,745 - RS_RS06670 0.56 -1.2 1,417,596 + -0.1 1,417,596 + +0.1 1,417,596 + -0.0 1,417,597 - -0.3 1,417,597 - -1.6 1,417,602 + -1.6 1,417,603 - -0.0 1,417,746 - RS_RS06680 0.30 -0.3 1,418,252 - RS_RS06685 0.36 -0.1 1,418,401 + RS_RS06685 0.76 +0.9 1,418,557 + +0.6 1,418,557 + +0.6 1,418,558 - -0.4 1,418,566 + +0.1 1,418,580 + +0.1 1,418,613 - +0.7 1,418,963 + RS_RS06690 0.14 +0.4 1,418,963 + RS_RS06690 0.14 -1.9 1,418,963 + RS_RS06690 0.14 -0.7 1,419,008 + RS_RS06690 0.16 -0.5 1,419,087 - RS_RS06690 0.20 -0.1
Or see this region's nucleotide sequence