Experiment: M63_quarter_strength
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS01695 and RS_RS01700 are separated by 28 nucleotides RS_RS01700 and RS_RS01705 are separated by 110 nucleotides RS_RS01705 and RS_RS01710 overlap by 32 nucleotides RS_RS01710 and RS_RS01715 are separated by 46 nucleotides
RS_RS01695: RS_RS01695 - glutamate--cysteine ligase, at 376,641 to 377,936
_RS01695
RS_RS01700: RS_RS01700 - glutathione synthetase, at 377,965 to 378,939
_RS01700
RS_RS01705: RS_RS01705 - PTS fructose transporter subunit IIA, at 379,050 to 379,505
_RS01705
RS_RS01710: RS_RS01710 - HPr family phosphocarrier protein, at 379,474 to 379,743
_RS01710
RS_RS01715: RS_RS01715 - phosphoenolpyruvate--protein phosphotransferase, at 379,790 to 381,550
_RS01715
Position (kb) 377
378
379 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 377.512 kb on - strand, within RS_RS01695 at 377.946 kb on + strand at 377.947 kb on - strand at 378.010 kb on + strand at 378.067 kb on + strand, within RS_RS01700 at 378.068 kb on - strand, within RS_RS01700 at 378.068 kb on - strand, within RS_RS01700 at 378.068 kb on - strand, within RS_RS01700 at 378.244 kb on + strand, within RS_RS01700 at 378.245 kb on - strand, within RS_RS01700 at 378.245 kb on - strand, within RS_RS01700 at 378.436 kb on + strand, within RS_RS01700 at 378.559 kb on + strand, within RS_RS01700 at 378.559 kb on + strand, within RS_RS01700 at 378.560 kb on - strand, within RS_RS01700 at 379.017 kb on - strand at 379.017 kb on - strand at 379.357 kb on - strand, within RS_RS01705 at 379.357 kb on - strand, within RS_RS01705 at 379.473 kb on + strand at 379.473 kb on + strand at 379.473 kb on + strand at 379.473 kb on + strand at 379.474 kb on - strand at 379.504 kb on - strand at 379.504 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M63_quarter_strength remove 377,512 - RS_RS01695 0.67 +0.5 377,946 + -0.1 377,947 - -0.2 378,010 + +0.1 378,067 + RS_RS01700 0.10 -1.8 378,068 - RS_RS01700 0.11 -2.8 378,068 - RS_RS01700 0.11 +0.5 378,068 - RS_RS01700 0.11 +0.2 378,244 + RS_RS01700 0.29 -1.1 378,245 - RS_RS01700 0.29 -0.3 378,245 - RS_RS01700 0.29 -0.8 378,436 + RS_RS01700 0.48 -0.4 378,559 + RS_RS01700 0.61 -0.3 378,559 + RS_RS01700 0.61 -1.2 378,560 - RS_RS01700 0.61 +0.5 379,017 - +0.0 379,017 - -1.1 379,357 - RS_RS01705 0.67 -2.3 379,357 - RS_RS01705 0.67 -2.6 379,473 + -0.5 379,473 + +0.1 379,473 + -1.2 379,473 + +0.1 379,474 - -1.1 379,504 - -1.7 379,504 - -0.9
Or see this region's nucleotide sequence