Experiment: Growth at pH7 and (C) D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS26090 and PFLU_RS26095 are separated by 361 nucleotides PFLU_RS26095 and PFLU_RS26100 are separated by 299 nucleotides
PFLU_RS26090: PFLU_RS26090 - methyl-accepting chemotaxis protein, at 5,827,876 to 5,829,837
_RS26090
PFLU_RS26095: PFLU_RS26095 - hypothetical protein, at 5,830,199 to 5,830,453
_RS26095
PFLU_RS26100: PFLU_RS26100 - hypothetical protein, at 5,830,753 to 5,831,793
_RS26100
Position (kb) 5830
5831 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 5830.046 kb on + strand at 5830.046 kb on + strand at 5830.046 kb on + strand at 5830.046 kb on + strand at 5830.046 kb on + strand at 5830.046 kb on + strand at 5830.070 kb on + strand at 5830.070 kb on + strand at 5830.079 kb on + strand at 5830.080 kb on - strand at 5830.080 kb on - strand at 5830.080 kb on - strand at 5830.105 kb on + strand at 5830.105 kb on + strand at 5830.105 kb on + strand at 5830.106 kb on - strand at 5830.106 kb on - strand at 5830.106 kb on - strand at 5830.118 kb on + strand at 5830.119 kb on - strand at 5830.168 kb on + strand at 5830.169 kb on - strand at 5830.169 kb on - strand at 5830.210 kb on + strand at 5830.266 kb on + strand, within PFLU_RS26095 at 5830.266 kb on + strand, within PFLU_RS26095 at 5830.267 kb on - strand, within PFLU_RS26095 at 5830.267 kb on - strand, within PFLU_RS26095 at 5830.267 kb on - strand, within PFLU_RS26095 at 5830.324 kb on + strand, within PFLU_RS26095 at 5830.341 kb on + strand, within PFLU_RS26095 at 5830.341 kb on + strand, within PFLU_RS26095 at 5830.343 kb on + strand, within PFLU_RS26095 at 5830.343 kb on + strand, within PFLU_RS26095 at 5830.343 kb on + strand, within PFLU_RS26095 at 5830.344 kb on - strand, within PFLU_RS26095 at 5830.363 kb on + strand, within PFLU_RS26095 at 5830.363 kb on + strand, within PFLU_RS26095 at 5830.364 kb on - strand, within PFLU_RS26095 at 5830.364 kb on - strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.365 kb on + strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.366 kb on - strand, within PFLU_RS26095 at 5830.408 kb on - strand, within PFLU_RS26095 at 5830.408 kb on - strand, within PFLU_RS26095 at 5830.430 kb on + strand at 5830.430 kb on + strand at 5830.431 kb on - strand at 5830.431 kb on - strand at 5830.433 kb on - strand at 5830.433 kb on - strand at 5830.474 kb on + strand at 5830.474 kb on + strand at 5830.475 kb on - strand at 5830.573 kb on + strand at 5830.591 kb on + strand at 5830.591 kb on + strand at 5830.591 kb on + strand at 5830.591 kb on + strand at 5830.591 kb on + strand at 5830.591 kb on + strand at 5830.638 kb on + strand at 5830.638 kb on + strand at 5830.638 kb on + strand at 5830.639 kb on - strand at 5830.654 kb on + strand at 5830.654 kb on + strand at 5830.654 kb on + strand at 5830.654 kb on + strand at 5830.654 kb on + strand at 5830.655 kb on - strand at 5830.655 kb on - strand at 5830.655 kb on - strand at 5830.658 kb on + strand at 5830.678 kb on + strand at 5830.714 kb on + strand at 5830.733 kb on - strand at 5830.769 kb on + strand at 5830.776 kb on + strand at 5830.776 kb on + strand at 5830.777 kb on - strand at 5830.780 kb on + strand at 5830.780 kb on + strand at 5830.780 kb on + strand at 5830.821 kb on + strand at 5830.900 kb on + strand, within PFLU_RS26100 at 5830.900 kb on + strand, within PFLU_RS26100 at 5830.901 kb on - strand, within PFLU_RS26100 at 5830.902 kb on + strand, within PFLU_RS26100 at 5830.995 kb on + strand, within PFLU_RS26100 at 5830.995 kb on + strand, within PFLU_RS26100 at 5830.995 kb on + strand, within PFLU_RS26100 at 5830.996 kb on - strand, within PFLU_RS26100 at 5830.996 kb on - strand, within PFLU_RS26100 at 5830.996 kb on - strand, within PFLU_RS26100 at 5830.996 kb on - strand, within PFLU_RS26100 at 5831.032 kb on + strand, within PFLU_RS26100 at 5831.033 kb on - strand, within PFLU_RS26100 at 5831.044 kb on + strand, within PFLU_RS26100 at 5831.044 kb on + strand, within PFLU_RS26100 at 5831.044 kb on + strand, within PFLU_RS26100 at 5831.044 kb on + strand, within PFLU_RS26100 at 5831.045 kb on - strand, within PFLU_RS26100 at 5831.045 kb on - strand, within PFLU_RS26100 at 5831.045 kb on - strand, within PFLU_RS26100 at 5831.084 kb on - strand, within PFLU_RS26100 at 5831.084 kb on - strand, within PFLU_RS26100 at 5831.084 kb on - strand, within PFLU_RS26100 at 5831.097 kb on + strand, within PFLU_RS26100 at 5831.098 kb on - strand, within PFLU_RS26100 at 5831.145 kb on + strand, within PFLU_RS26100 at 5831.145 kb on + strand, within PFLU_RS26100 at 5831.146 kb on - strand, within PFLU_RS26100 at 5831.146 kb on - strand, within PFLU_RS26100 at 5831.146 kb on - strand, within PFLU_RS26100 at 5831.185 kb on + strand, within PFLU_RS26100 at 5831.185 kb on + strand, within PFLU_RS26100 at 5831.185 kb on + strand, within PFLU_RS26100 at 5831.185 kb on + strand, within PFLU_RS26100 at 5831.186 kb on - strand, within PFLU_RS26100 at 5831.213 kb on - strand, within PFLU_RS26100 at 5831.213 kb on - strand, within PFLU_RS26100 at 5831.213 kb on - strand, within PFLU_RS26100 at 5831.221 kb on + strand, within PFLU_RS26100 at 5831.222 kb on - strand, within PFLU_RS26100 at 5831.222 kb on - strand, within PFLU_RS26100 at 5831.265 kb on + strand, within PFLU_RS26100 at 5831.265 kb on + strand, within PFLU_RS26100 at 5831.265 kb on + strand, within PFLU_RS26100 at 5831.266 kb on - strand, within PFLU_RS26100 at 5831.314 kb on - strand, within PFLU_RS26100 at 5831.334 kb on + strand, within PFLU_RS26100 at 5831.334 kb on + strand, within PFLU_RS26100 at 5831.334 kb on + strand, within PFLU_RS26100 at 5831.334 kb on + strand, within PFLU_RS26100 at 5831.335 kb on - strand, within PFLU_RS26100 at 5831.335 kb on - strand, within PFLU_RS26100 at 5831.359 kb on - strand, within PFLU_RS26100 at 5831.385 kb on - strand, within PFLU_RS26100 at 5831.445 kb on + strand, within PFLU_RS26100
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at pH7 and (C) D-Glucose remove 5,830,046 + -1.9 5,830,046 + +0.6 5,830,046 + +0.3 5,830,046 + -0.1 5,830,046 + -1.4 5,830,046 + +1.6 5,830,070 + -1.1 5,830,070 + -2.1 5,830,079 + -2.2 5,830,080 - +0.3 5,830,080 - -0.9 5,830,080 - -1.2 5,830,105 + +2.3 5,830,105 + +1.4 5,830,105 + +0.3 5,830,106 - +2.7 5,830,106 - +1.3 5,830,106 - +0.2 5,830,118 + +1.5 5,830,119 - -2.6 5,830,168 + -0.4 5,830,169 - -0.8 5,830,169 - -1.4 5,830,210 + +0.7 5,830,266 + PFLU_RS26095 0.26 -2.9 5,830,266 + PFLU_RS26095 0.26 -1.1 5,830,267 - PFLU_RS26095 0.27 +1.3 5,830,267 - PFLU_RS26095 0.27 +1.0 5,830,267 - PFLU_RS26095 0.27 +0.1 5,830,324 + PFLU_RS26095 0.49 -0.0 5,830,341 + PFLU_RS26095 0.56 +2.6 5,830,341 + PFLU_RS26095 0.56 -0.0 5,830,343 + PFLU_RS26095 0.56 +0.1 5,830,343 + PFLU_RS26095 0.56 -1.6 5,830,343 + PFLU_RS26095 0.56 +1.3 5,830,344 - PFLU_RS26095 0.57 +0.7 5,830,363 + PFLU_RS26095 0.64 -1.0 5,830,363 + PFLU_RS26095 0.64 -1.0 5,830,364 - PFLU_RS26095 0.65 +1.2 5,830,364 - PFLU_RS26095 0.65 +0.8 5,830,365 + PFLU_RS26095 0.65 -1.0 5,830,365 + PFLU_RS26095 0.65 +0.1 5,830,365 + PFLU_RS26095 0.65 -0.3 5,830,365 + PFLU_RS26095 0.65 -1.7 5,830,365 + PFLU_RS26095 0.65 -1.4 5,830,365 + PFLU_RS26095 0.65 +1.0 5,830,365 + PFLU_RS26095 0.65 +0.1 5,830,365 + PFLU_RS26095 0.65 +1.7 5,830,365 + PFLU_RS26095 0.65 -1.1 5,830,366 - PFLU_RS26095 0.65 -0.0 5,830,366 - PFLU_RS26095 0.65 +1.6 5,830,366 - PFLU_RS26095 0.65 -0.9 5,830,366 - PFLU_RS26095 0.65 +1.6 5,830,366 - PFLU_RS26095 0.65 +2.8 5,830,366 - PFLU_RS26095 0.65 +1.3 5,830,366 - PFLU_RS26095 0.65 +0.9 5,830,366 - PFLU_RS26095 0.65 +2.0 5,830,366 - PFLU_RS26095 0.65 +0.7 5,830,408 - PFLU_RS26095 0.82 +0.6 5,830,408 - PFLU_RS26095 0.82 +1.1 5,830,430 + +1.0 5,830,430 + -3.2 5,830,431 - +0.7 5,830,431 - +2.7 5,830,433 - +0.4 5,830,433 - -1.9 5,830,474 + -0.7 5,830,474 + +0.7 5,830,475 - +2.0 5,830,573 + -1.9 5,830,591 + -0.5 5,830,591 + -0.3 5,830,591 + -0.7 5,830,591 + +1.3 5,830,591 + +2.7 5,830,591 + -1.4 5,830,638 + -1.5 5,830,638 + -2.2 5,830,638 + -0.3 5,830,639 - +2.6 5,830,654 + +0.1 5,830,654 + -1.4 5,830,654 + +3.2 5,830,654 + -1.5 5,830,654 + -0.5 5,830,655 - -0.5 5,830,655 - +0.5 5,830,655 - +1.6 5,830,658 + +5.3 5,830,678 + -0.3 5,830,714 + +1.5 5,830,733 - -0.3 5,830,769 + +1.3 5,830,776 + -0.5 5,830,776 + +1.7 5,830,777 - +1.1 5,830,780 + +0.4 5,830,780 + +2.5 5,830,780 + -2.6 5,830,821 + +0.7 5,830,900 + PFLU_RS26100 0.14 -2.1 5,830,900 + PFLU_RS26100 0.14 +0.1 5,830,901 - PFLU_RS26100 0.14 +1.1 5,830,902 + PFLU_RS26100 0.14 -0.9 5,830,995 + PFLU_RS26100 0.23 +0.7 5,830,995 + PFLU_RS26100 0.23 +0.2 5,830,995 + PFLU_RS26100 0.23 -0.5 5,830,996 - PFLU_RS26100 0.23 -2.0 5,830,996 - PFLU_RS26100 0.23 +1.4 5,830,996 - PFLU_RS26100 0.23 +0.0 5,830,996 - PFLU_RS26100 0.23 +0.7 5,831,032 + PFLU_RS26100 0.27 -1.5 5,831,033 - PFLU_RS26100 0.27 +1.5 5,831,044 + PFLU_RS26100 0.28 +3.3 5,831,044 + PFLU_RS26100 0.28 +0.7 5,831,044 + PFLU_RS26100 0.28 +1.1 5,831,044 + PFLU_RS26100 0.28 +0.5 5,831,045 - PFLU_RS26100 0.28 -1.3 5,831,045 - PFLU_RS26100 0.28 +0.3 5,831,045 - PFLU_RS26100 0.28 -1.3 5,831,084 - PFLU_RS26100 0.32 -0.3 5,831,084 - PFLU_RS26100 0.32 -2.1 5,831,084 - PFLU_RS26100 0.32 -1.9 5,831,097 + PFLU_RS26100 0.33 +2.1 5,831,098 - PFLU_RS26100 0.33 +0.9 5,831,145 + PFLU_RS26100 0.38 +1.1 5,831,145 + PFLU_RS26100 0.38 +0.3 5,831,146 - PFLU_RS26100 0.38 -0.0 5,831,146 - PFLU_RS26100 0.38 -1.0 5,831,146 - PFLU_RS26100 0.38 -0.1 5,831,185 + PFLU_RS26100 0.41 +3.1 5,831,185 + PFLU_RS26100 0.41 +2.1 5,831,185 + PFLU_RS26100 0.41 -1.5 5,831,185 + PFLU_RS26100 0.41 -1.4 5,831,186 - PFLU_RS26100 0.42 +0.5 5,831,213 - PFLU_RS26100 0.44 -0.9 5,831,213 - PFLU_RS26100 0.44 -0.8 5,831,213 - PFLU_RS26100 0.44 +0.8 5,831,221 + PFLU_RS26100 0.45 -1.0 5,831,222 - PFLU_RS26100 0.45 -0.6 5,831,222 - PFLU_RS26100 0.45 +0.4 5,831,265 + PFLU_RS26100 0.49 +3.1 5,831,265 + PFLU_RS26100 0.49 +1.8 5,831,265 + PFLU_RS26100 0.49 +0.3 5,831,266 - PFLU_RS26100 0.49 +0.9 5,831,314 - PFLU_RS26100 0.54 -2.2 5,831,334 + PFLU_RS26100 0.56 -0.2 5,831,334 + PFLU_RS26100 0.56 -1.0 5,831,334 + PFLU_RS26100 0.56 -0.0 5,831,334 + PFLU_RS26100 0.56 +2.5 5,831,335 - PFLU_RS26100 0.56 -0.5 5,831,335 - PFLU_RS26100 0.56 -2.3 5,831,359 - PFLU_RS26100 0.58 -1.9 5,831,385 - PFLU_RS26100 0.61 +1.3 5,831,445 + PFLU_RS26100 0.66 -0.0
Or see this region's nucleotide sequence