Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05595

Experiment: Growth at pH7 and (C) D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at pH7 and (C) D-Glucose
1,260,800	-		PFLU_RS05590	0.33	-1.4
1,260,929	+		PFLU_RS05590	0.42	-3.1
1,260,929	+		PFLU_RS05590	0.42	-1.2
1,260,930	-		PFLU_RS05590	0.42	-1.5
1,260,930	-		PFLU_RS05590	0.42	-1.8
1,260,930	-		PFLU_RS05590	0.42	+0.6
1,260,977	+		PFLU_RS05590	0.46	+0.0
1,260,977	+		PFLU_RS05590	0.46	+1.5
1,260,977	+		PFLU_RS05590	0.46	-1.7
1,260,977	+		PFLU_RS05590	0.46	+1.2
1,260,977	+		PFLU_RS05590	0.46	-0.8
1,260,977	+		PFLU_RS05590	0.46	-1.0
1,260,977	+		PFLU_RS05590	0.46	+1.0
1,260,977	+		PFLU_RS05590	0.46	-1.8
1,261,017	-		PFLU_RS05590	0.48	-1.7
1,261,017	-		PFLU_RS05590	0.48	-1.8
1,261,028	+		PFLU_RS05590	0.49	-0.6
1,261,059	-		PFLU_RS05590	0.51	+0.2
1,261,154	+		PFLU_RS05590	0.58	+0.2
1,261,547	+		PFLU_RS05590	0.86	-0.2
1,261,547	+		PFLU_RS05590	0.86	+0.8
1,261,547	+		PFLU_RS05590	0.86	-1.0
1,261,547	+		PFLU_RS05590	0.86	+0.6
1,261,547	+		PFLU_RS05590	0.86	+3.2
1,261,547	+		PFLU_RS05590	0.86	+2.2
1,261,547	+		PFLU_RS05590	0.86	-2.1
1,261,547	+		PFLU_RS05590	0.86	-1.2
1,261,547	+		PFLU_RS05590	0.86	-0.8
1,261,547	+		PFLU_RS05590	0.86	-2.0
1,261,547	+		PFLU_RS05590	0.86	+3.0
1,261,547	+		PFLU_RS05590	0.86	-1.2
1,261,547	+		PFLU_RS05590	0.86	-1.2
1,261,547	+		PFLU_RS05590	0.86	-1.2
1,261,547	+		PFLU_RS05590	0.86	-0.8
1,261,548	-		PFLU_RS05590	0.87	+1.2
1,261,548	-		PFLU_RS05590	0.87	-0.6
1,261,548	-		PFLU_RS05590	0.87	+1.2
1,261,548	-		PFLU_RS05590	0.87	+1.4
1,261,548	-		PFLU_RS05590	0.87	-1.9
1,261,548	-		PFLU_RS05590	0.87	+1.1
1,261,548	-		PFLU_RS05590	0.87	+1.2
1,261,581	+		PFLU_RS05590	0.89	-1.7
1,261,581	+		PFLU_RS05590	0.89	-0.2
1,261,581	+		PFLU_RS05590	0.89	+1.8
1,261,581	+		PFLU_RS05590	0.89	-0.7
1,261,582	-		PFLU_RS05590	0.89	-2.6
1,261,626	-				+1.3
1,261,626	-				-1.3
1,261,628	+				-0.7
1,261,628	+				-1.0
1,261,628	+				+2.2
1,261,628	+				-0.4
1,261,628	+				-0.2
1,261,628	+				-1.3
1,261,628	+				-1.2
1,261,629	-				-3.1
1,261,629	-				-2.2
1,261,629	-				+1.8
1,261,629	-				-1.9
1,261,629	-				-1.0
1,261,888	+		PFLU_RS05595	0.17	+1.3
1,261,888	+		PFLU_RS05595	0.17	-0.8
1,261,888	+		PFLU_RS05595	0.17	+1.2
1,261,888	+		PFLU_RS05595	0.17	-2.7
1,261,888	+		PFLU_RS05595	0.17	+1.2
1,261,888	+		PFLU_RS05595	0.17	+1.6
1,261,888	+		PFLU_RS05595	0.17	-1.8
1,261,888	+		PFLU_RS05595	0.17	-2.0
1,261,888	+		PFLU_RS05595	0.17	-1.4
1,261,888	+		PFLU_RS05595	0.17	-1.8
1,261,889	-		PFLU_RS05595	0.17	-0.7
1,261,889	-		PFLU_RS05595	0.17	-0.5
1,261,889	-		PFLU_RS05595	0.17	+1.5
1,261,889	-		PFLU_RS05595	0.17	-0.8
1,261,889	-		PFLU_RS05595	0.17	-0.8
1,261,889	-		PFLU_RS05595	0.17	-1.3
1,261,889	-		PFLU_RS05595	0.17	-0.4
1,261,889	-		PFLU_RS05595	0.17	+0.4
1,261,889	-		PFLU_RS05595	0.17	-1.3
1,261,889	-		PFLU_RS05595	0.17	-1.2
1,261,896	+		PFLU_RS05595	0.18	-0.2
1,261,957	+		PFLU_RS05595	0.25	-1.8
1,262,050	+		PFLU_RS05595	0.35	+0.2
1,262,051	-		PFLU_RS05595	0.35	+1.9
1,262,051	-		PFLU_RS05595	0.35	-1.0
1,262,051	-		PFLU_RS05595	0.35	-2.5
1,262,051	-		PFLU_RS05595	0.35	-0.7
1,262,095	+		PFLU_RS05595	0.40	-0.8
1,262,095	+		PFLU_RS05595	0.40	+1.5
1,262,096	-		PFLU_RS05595	0.40	-1.9
1,262,096	-		PFLU_RS05595	0.40	-2.5
1,262,096	-		PFLU_RS05595	0.40	-1.7
1,262,096	-		PFLU_RS05595	0.40	-1.8
1,262,096	-		PFLU_RS05595	0.40	-0.2
1,262,096	-		PFLU_RS05595	0.40	+0.9
1,262,096	-		PFLU_RS05595	0.40	+1.0
1,262,113	+		PFLU_RS05595	0.42	-1.3
1,262,113	+		PFLU_RS05595	0.42	+0.3
1,262,113	+		PFLU_RS05595	0.42	-2.8
1,262,113	+		PFLU_RS05595	0.42	+0.2
1,262,113	+		PFLU_RS05595	0.42	-0.2
1,262,114	-		PFLU_RS05595	0.42	-2.2
1,262,114	-		PFLU_RS05595	0.42	-0.4
1,262,114	-		PFLU_RS05595	0.42	+0.5
1,262,212	+		PFLU_RS05595	0.53	-1.8
1,262,369	+		PFLU_RS05595	0.71	-0.2
1,262,370	-		PFLU_RS05595	0.71	+0.2
1,262,428	+		PFLU_RS05595	0.77	+0.6
1,262,429	-		PFLU_RS05595	0.77	-1.2
1,262,483	-		PFLU_RS05595	0.83	+0.9
1,262,528	+		PFLU_RS05595	0.88	+0.6
1,262,528	+		PFLU_RS05595	0.88	-2.4
1,262,529	-		PFLU_RS05595	0.89	+1.0
1,262,559	-				-2.1
1,262,559	-				-0.7
1,262,559	-				-0.4
1,262,559	-				+1.2
1,262,559	-				-1.9
1,262,559	-				+1.8
1,262,559	-				-1.9
1,262,563	-				+0.2
1,262,563	-				+0.4
1,262,563	-				+1.5
1,262,563	-				-0.7
1,262,563	-				-1.2
1,262,563	-				-0.7
1,262,563	-				-2.0
1,262,563	-				-0.7
1,262,630	-				-0.4
1,262,630	-				+2.2
1,262,650	-				-3.5
1,262,720	-				+0.4
1,262,720	-				+1.2
1,262,720	-				-1.7
1,262,841	+				-1.0
1,262,841	+				+1.2
1,262,841	+				-0.4
1,262,842	-				+1.3
1,262,844	+				-1.0
1,262,844	+				-3.6
1,262,845	-				-3.2
1,262,845	-				+1.2
1,262,845	-				-0.8
1,262,845	-				-1.3
1,262,845	-				+0.2
1,262,845	-				+0.6
1,262,845	-				-0.8
1,262,845	-				+1.0
1,262,889	+		PFLU_RS05600	0.12	-1.2
1,262,889	+		PFLU_RS05600	0.12	+0.8
1,262,890	-		PFLU_RS05600	0.12	-2.5
1,262,901	+		PFLU_RS05600	0.13	+1.3
1,263,039	+		PFLU_RS05600	0.26	+1.6
1,263,039	+		PFLU_RS05600	0.26	+1.4
1,263,039	+		PFLU_RS05600	0.26	+1.7
1,263,039	+		PFLU_RS05600	0.26	+1.2
1,263,039	+		PFLU_RS05600	0.26	-1.5
1,263,040	-		PFLU_RS05600	0.26	-1.4
1,263,040	-		PFLU_RS05600	0.26	-2.1
1,263,040	-		PFLU_RS05600	0.26	-0.2
1,263,040	-		PFLU_RS05600	0.26	+1.2
1,263,040	-		PFLU_RS05600	0.26	-1.7
1,263,040	-		PFLU_RS05600	0.26	+1.9
1,263,303	+		PFLU_RS05600	0.49	+0.6
1,263,304	-		PFLU_RS05600	0.49	-1.2
1,263,304	-		PFLU_RS05600	0.49	+0.8
1,263,423	+		PFLU_RS05600	0.60	+1.0
1,263,423	+		PFLU_RS05600	0.60	+2.4
1,263,423	+		PFLU_RS05600	0.60	-0.7
1,263,423	+		PFLU_RS05600	0.60	-3.5
1,263,423	+		PFLU_RS05600	0.60	+0.2
1,263,424	-		PFLU_RS05600	0.60	+1.7
1,263,424	-		PFLU_RS05600	0.60	+1.0
1,263,477	+		PFLU_RS05600	0.65	+0.6
1,263,477	+		PFLU_RS05600	0.65	-1.3
1,263,477	+		PFLU_RS05600	0.65	-1.0
1,263,477	+		PFLU_RS05600	0.65	-1.4
1,263,478	-		PFLU_RS05600	0.65	+0.9
1,263,478	-		PFLU_RS05600	0.65	+0.4
1,263,478	-		PFLU_RS05600	0.65	+1.3
1,263,478	-		PFLU_RS05600	0.65	-1.7
1,263,528	+		PFLU_RS05600	0.69	+1.6
1,263,630	+		PFLU_RS05600	0.78	+2.3
1,263,630	+		PFLU_RS05600	0.78	+1.5
1,263,630	+		PFLU_RS05600	0.78	+0.8
1,263,630	+		PFLU_RS05600	0.78	+0.4
1,263,630	+		PFLU_RS05600	0.78	-0.7
1,263,630	+		PFLU_RS05600	0.78	-2.5
1,263,630	+		PFLU_RS05600	0.78	-0.7
1,263,631	-		PFLU_RS05600	0.78	-1.0
1,263,631	-		PFLU_RS05600	0.78	-2.4
1,263,631	-		PFLU_RS05600	0.78	-1.8
1,263,631	-		PFLU_RS05600	0.78	+1.7