Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS12155

Experiment: R2A with Ferric chloride 1.5625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ferric chloride 1.5625 mM
2,704,600	+		LRK54_RS12150	0.36	-0.3
2,704,600	+		LRK54_RS12150	0.36	+0.3
2,704,600	+		LRK54_RS12150	0.36	-0.6
2,704,600	+		LRK54_RS12150	0.36	-0.7
2,704,600	+		LRK54_RS12150	0.36	-0.8
2,704,600	+		LRK54_RS12150	0.36	-0.6
2,704,600	+		LRK54_RS12150	0.36	+0.5
2,704,600	+		LRK54_RS12150	0.36	-0.2
2,704,600	+		LRK54_RS12150	0.36	+1.3
2,704,600	+		LRK54_RS12150	0.36	+0.0
2,704,600	+		LRK54_RS12150	0.36	-0.4
2,704,600	+		LRK54_RS12150	0.36	-0.2
2,704,600	+		LRK54_RS12150	0.36	+0.5
2,704,601	-		LRK54_RS12150	0.36	+1.8
2,704,601	-		LRK54_RS12150	0.36	-2.1
2,704,601	-		LRK54_RS12150	0.36	+0.2
2,704,601	-		LRK54_RS12150	0.36	+0.5
2,704,601	-		LRK54_RS12150	0.36	-0.9
2,704,601	-		LRK54_RS12150	0.36	-0.5
2,704,601	-		LRK54_RS12150	0.36	+0.4
2,704,601	-		LRK54_RS12150	0.36	+0.8
2,704,601	-		LRK54_RS12150	0.36	-0.3
2,704,601	-		LRK54_RS12150	0.36	+1.6
2,704,601	-		LRK54_RS12150	0.36	-0.4
2,704,601	-		LRK54_RS12150	0.36	-0.5
2,704,601	-		LRK54_RS12150	0.36	-0.4
2,704,601	-		LRK54_RS12150	0.36	-0.3
2,704,601	-		LRK54_RS12150	0.36	+2.8
2,704,601	-		LRK54_RS12150	0.36	-0.1
2,704,601	-		LRK54_RS12150	0.36	-1.3
2,704,601	-		LRK54_RS12150	0.36	+0.4
2,704,601	-		LRK54_RS12150	0.36	-0.5
2,704,603	+		LRK54_RS12150	0.36	+0.7
2,704,603	+		LRK54_RS12150	0.36	-1.0
2,704,603	+		LRK54_RS12150	0.36	+0.7
2,704,603	+		LRK54_RS12150	0.36	+0.3
2,704,603	+		LRK54_RS12150	0.36	-0.0
2,704,603	+		LRK54_RS12150	0.36	+0.7
2,704,603	+		LRK54_RS12150	0.36	-1.2
2,704,603	+		LRK54_RS12150	0.36	+1.3
2,704,603	+		LRK54_RS12150	0.36	+0.9
2,704,603	+		LRK54_RS12150	0.36	-0.3
2,704,603	+		LRK54_RS12150	0.36	+0.5
2,704,603	+		LRK54_RS12150	0.36	+0.2
2,704,603	+		LRK54_RS12150	0.36	-1.0
2,704,603	+		LRK54_RS12150	0.36	+0.1
2,704,603	+		LRK54_RS12150	0.36	-0.8
2,704,603	+		LRK54_RS12150	0.36	+0.2
2,704,603	+		LRK54_RS12150	0.36	+0.2
2,704,604	-		LRK54_RS12150	0.36	+3.1
2,704,604	-		LRK54_RS12150	0.36	-0.1
2,704,604	-		LRK54_RS12150	0.36	+0.4
2,704,604	-		LRK54_RS12150	0.36	-0.2
2,704,604	-		LRK54_RS12150	0.36	+0.5
2,704,604	-		LRK54_RS12150	0.36	-0.3
2,704,604	-		LRK54_RS12150	0.36	-0.3
2,704,604	-		LRK54_RS12150	0.36	+1.2
2,704,604	-		LRK54_RS12150	0.36	+0.8
2,704,604	-		LRK54_RS12150	0.36	+0.8
2,704,604	-		LRK54_RS12150	0.36	-0.1
2,704,604	-		LRK54_RS12150	0.36	+0.2
2,704,604	-		LRK54_RS12150	0.36	+0.0
2,704,604	-		LRK54_RS12150	0.36	-0.8
2,704,604	-		LRK54_RS12150	0.36	+1.4
2,704,604	-		LRK54_RS12150	0.36	-2.5
2,704,604	-		LRK54_RS12150	0.36	-1.6
2,704,604	-		LRK54_RS12150	0.36	-0.5
2,704,604	-		LRK54_RS12150	0.36	-2.0
2,704,604	-		LRK54_RS12150	0.36	+1.0
2,704,604	-		LRK54_RS12150	0.36	+0.1
2,704,604	-		LRK54_RS12150	0.36	+0.7
2,704,753	+		LRK54_RS12150	0.46	+0.4
2,704,753	+		LRK54_RS12150	0.46	-0.4
2,704,753	+		LRK54_RS12150	0.46	-1.0
2,704,753	+		LRK54_RS12150	0.46	+0.3
2,704,753	+		LRK54_RS12150	0.46	-1.1
2,704,753	+		LRK54_RS12150	0.46	+0.9
2,704,753	+		LRK54_RS12150	0.46	+0.1
2,704,753	+		LRK54_RS12150	0.46	+0.7
2,704,753	+		LRK54_RS12150	0.46	-0.1
2,704,753	+		LRK54_RS12150	0.46	-1.2
2,704,753	+		LRK54_RS12150	0.46	+0.8
2,704,753	+		LRK54_RS12150	0.46	+0.8
2,704,753	+		LRK54_RS12150	0.46	-0.9
2,704,754	-		LRK54_RS12150	0.46	+0.0
2,704,754	-		LRK54_RS12150	0.46	-0.6
2,704,765	+		LRK54_RS12150	0.47	-0.2
2,704,765	+		LRK54_RS12150	0.47	+0.7
2,704,765	+		LRK54_RS12150	0.47	-0.5
2,704,766	-		LRK54_RS12150	0.47	+1.4
2,704,766	-		LRK54_RS12150	0.47	+0.1
2,704,766	-		LRK54_RS12150	0.47	+0.4
2,704,766	-		LRK54_RS12150	0.47	-1.2
2,704,798	+		LRK54_RS12150	0.49	+0.4
2,704,798	+		LRK54_RS12150	0.49	+2.1
2,704,798	+		LRK54_RS12150	0.49	+0.1
2,704,798	+		LRK54_RS12150	0.49	-0.0
2,704,798	+		LRK54_RS12150	0.49	-0.7
2,704,798	+		LRK54_RS12150	0.49	+1.8
2,704,799	-		LRK54_RS12150	0.49	-0.5
2,704,799	-		LRK54_RS12150	0.49	-3.1
2,704,799	-		LRK54_RS12150	0.49	-1.2
2,704,799	-		LRK54_RS12150	0.49	-0.4
2,704,799	-		LRK54_RS12150	0.49	-0.8
2,704,870	+		LRK54_RS12150	0.54	-0.2
2,704,870	+		LRK54_RS12150	0.54	+0.8
2,704,870	+		LRK54_RS12150	0.54	+0.8
2,704,870	+		LRK54_RS12150	0.54	-0.4
2,704,870	+		LRK54_RS12150	0.54	-0.4
2,704,870	+		LRK54_RS12150	0.54	+0.0
2,704,870	+		LRK54_RS12150	0.54	+1.8
2,704,870	+		LRK54_RS12150	0.54	+0.2
2,704,870	+		LRK54_RS12150	0.54	+0.6
2,704,870	+		LRK54_RS12150	0.54	+0.4
2,704,870	+		LRK54_RS12150	0.54	-0.7
2,704,870	+		LRK54_RS12150	0.54	+0.4
2,704,870	+		LRK54_RS12150	0.54	-0.9
2,704,870	+		LRK54_RS12150	0.54	+0.4
2,704,871	-		LRK54_RS12150	0.54	+2.2
2,704,871	-		LRK54_RS12150	0.54	-0.4
2,704,871	-		LRK54_RS12150	0.54	+0.2
2,704,871	-		LRK54_RS12150	0.54	-1.6
2,704,871	-		LRK54_RS12150	0.54	-0.0
2,704,871	-		LRK54_RS12150	0.54	-0.9
2,704,871	-		LRK54_RS12150	0.54	+0.1
2,704,871	-		LRK54_RS12150	0.54	-1.9
2,704,871	-		LRK54_RS12150	0.54	+2.1
2,704,960	+		LRK54_RS12150	0.60	+0.6
2,704,960	+		LRK54_RS12150	0.60	+0.2
2,704,961	-		LRK54_RS12150	0.60	+0.2
2,704,961	-		LRK54_RS12150	0.60	+2.6
2,704,993	+		LRK54_RS12150	0.62	-0.8
2,704,993	+		LRK54_RS12150	0.62	-2.0
2,704,993	+		LRK54_RS12150	0.62	+0.5
2,704,993	+		LRK54_RS12150	0.62	-0.5
2,704,993	+		LRK54_RS12150	0.62	+0.3
2,704,993	+		LRK54_RS12150	0.62	-0.5
2,704,993	+		LRK54_RS12150	0.62	+0.2
2,704,993	+		LRK54_RS12150	0.62	-0.0
2,704,993	+		LRK54_RS12150	0.62	-1.9
2,704,993	+		LRK54_RS12150	0.62	+0.7
2,704,993	+		LRK54_RS12150	0.62	+0.7
2,704,993	+		LRK54_RS12150	0.62	+0.8
2,704,993	+		LRK54_RS12150	0.62	+0.2
2,704,993	+		LRK54_RS12150	0.62	+0.2
2,704,993	+		LRK54_RS12150	0.62	+0.5
2,704,993	+		LRK54_RS12150	0.62	-0.3
2,704,993	+		LRK54_RS12150	0.62	-0.4
2,704,994	-		LRK54_RS12150	0.62	+0.1
2,704,994	-		LRK54_RS12150	0.62	+1.4
2,704,994	-		LRK54_RS12150	0.62	+0.8
2,704,994	-		LRK54_RS12150	0.62	+0.4
2,704,994	-		LRK54_RS12150	0.62	-1.1
2,704,994	-		LRK54_RS12150	0.62	+0.2
2,704,994	-		LRK54_RS12150	0.62	-2.7
2,704,994	-		LRK54_RS12150	0.62	-0.3
2,704,994	-		LRK54_RS12150	0.62	-0.2
2,704,994	-		LRK54_RS12150	0.62	-1.4
2,704,994	-		LRK54_RS12150	0.62	-0.9
2,704,994	-		LRK54_RS12150	0.62	-0.5
2,704,994	-		LRK54_RS12150	0.62	-0.8
2,704,994	-		LRK54_RS12150	0.62	-0.5
2,704,994	-		LRK54_RS12150	0.62	-0.3
2,704,994	-		LRK54_RS12150	0.62	-3.3
2,704,994	-		LRK54_RS12150	0.62	+0.0
2,704,994	-		LRK54_RS12150	0.62	+0.2
2,704,994	-		LRK54_RS12150	0.62	-1.5
2,705,177	-		LRK54_RS12150	0.74	+0.2
2,705,239	+		LRK54_RS12150	0.79	+1.5
2,705,240	-		LRK54_RS12150	0.79	-0.3
2,705,240	-		LRK54_RS12150	0.79	+0.6
2,705,240	-		LRK54_RS12150	0.79	+0.7
2,705,240	-		LRK54_RS12150	0.79	+1.8
2,705,240	-		LRK54_RS12150	0.79	+0.7
2,705,284	+		LRK54_RS12150	0.82	-0.2
2,705,392	+		LRK54_RS12150	0.89	+0.1
2,705,392	+		LRK54_RS12150	0.89	-1.1
2,705,392	+		LRK54_RS12150	0.89	+1.2
2,705,392	+		LRK54_RS12150	0.89	+0.0
2,705,392	+		LRK54_RS12150	0.89	-0.4
2,705,393	-		LRK54_RS12150	0.89	-1.1
2,705,393	-		LRK54_RS12150	0.89	-0.4
2,705,393	-		LRK54_RS12150	0.89	+0.6
2,705,554	+				+0.4
2,705,554	+				+0.4
2,705,554	+				-1.0
2,705,554	+				-1.8
2,705,554	+				-1.1
2,705,554	+				+0.1
2,705,554	+				-1.8
2,705,554	+				-1.0
2,705,554	+				+1.7
2,705,554	+				-1.2
2,705,554	+				+0.7
2,705,554	+				+0.1
2,705,555	-				+0.9
2,705,555	-				-0.8
2,705,555	-				+0.5
2,705,555	-				+0.7
2,705,555	-				-0.3
2,705,555	-				-0.4
2,705,555	-				+0.2
2,705,555	-				-0.8
2,705,555	-				-0.0
2,705,555	-				+1.3
2,705,623	+		LRK54_RS12155	0.11	+0.5
2,705,623	+		LRK54_RS12155	0.11	-0.5
2,705,623	+		LRK54_RS12155	0.11	+0.9
2,705,623	+		LRK54_RS12155	0.11	+0.8
2,705,624	-		LRK54_RS12155	0.12	+1.8
2,705,636	-		LRK54_RS12155	0.14	-0.4
2,705,636	-		LRK54_RS12155	0.14	-1.0
2,705,821	+		LRK54_RS12155	0.55	-0.2
2,705,821	+		LRK54_RS12155	0.55	-1.6
2,705,821	+		LRK54_RS12155	0.55	-0.5
2,705,821	+		LRK54_RS12155	0.55	+0.5
2,705,821	+		LRK54_RS12155	0.55	+0.4
2,705,822	-		LRK54_RS12155	0.55	+0.2
2,705,822	-		LRK54_RS12155	0.55	+0.6
2,705,822	-		LRK54_RS12155	0.55	+0.0
2,705,822	-		LRK54_RS12155	0.55	+1.1
2,705,822	-		LRK54_RS12155	0.55	-1.0
2,705,822	-		LRK54_RS12155	0.55	+1.2
2,705,878	+		LRK54_RS12155	0.68	+0.8
2,705,878	+		LRK54_RS12155	0.68	-0.5
2,705,878	+		LRK54_RS12155	0.68	+0.9
2,705,878	+		LRK54_RS12155	0.68	-0.1
2,705,878	+		LRK54_RS12155	0.68	+2.0
2,705,878	+		LRK54_RS12155	0.68	+0.1
2,705,878	+		LRK54_RS12155	0.68	+1.3
2,705,878	+		LRK54_RS12155	0.68	+0.5
2,705,878	+		LRK54_RS12155	0.68	+0.1
2,705,878	+		LRK54_RS12155	0.68	+1.0
2,705,878	+		LRK54_RS12155	0.68	+1.2
2,705,878	+		LRK54_RS12155	0.68	+0.5
2,705,878	+		LRK54_RS12155	0.68	-0.0
2,705,878	+		LRK54_RS12155	0.68	+1.4
2,705,878	+		LRK54_RS12155	0.68	-2.4
2,705,878	+		LRK54_RS12155	0.68	-1.0
2,705,878	+		LRK54_RS12155	0.68	+0.1
2,705,879	-		LRK54_RS12155	0.68	-0.7
2,705,879	-		LRK54_RS12155	0.68	+0.7
2,705,879	-		LRK54_RS12155	0.68	+2.6
2,705,879	-		LRK54_RS12155	0.68	+2.0
2,705,879	-		LRK54_RS12155	0.68	+0.1
2,705,879	-		LRK54_RS12155	0.68	+0.8
2,705,879	-		LRK54_RS12155	0.68	+1.3
2,705,879	-		LRK54_RS12155	0.68	+0.0
2,705,879	-		LRK54_RS12155	0.68	+0.7
2,705,879	-		LRK54_RS12155	0.68	-0.2
2,705,879	-		LRK54_RS12155	0.68	+0.3
2,705,879	-		LRK54_RS12155	0.68	-1.2
2,705,879	-		LRK54_RS12155	0.68	-0.2
2,705,879	-		LRK54_RS12155	0.68	-0.3
2,705,879	-		LRK54_RS12155	0.68	+0.1
2,705,879	-		LRK54_RS12155	0.68	+0.0
2,705,879	-		LRK54_RS12155	0.68	+0.4
2,706,213	+				-0.2
2,706,213	+				-0.5
2,706,213	+				+2.5
2,706,214	-				-1.0
2,706,214	-				+0.2
2,706,246	+				+0.5
2,706,246	+				-0.5
2,706,246	+				+1.0
2,706,247	-				+0.2
2,706,247	-				+1.3
2,706,247	-				+0.2
2,706,247	-				+0.2
2,706,247	-				-0.3
2,706,247	-				+0.6
2,706,354	-				+0.8
2,706,354	-				+0.8
2,706,592	+		LRK54_RS12165	0.26	-0.2
2,706,593	+		LRK54_RS12165	0.26	+0.5
2,706,593	+		LRK54_RS12165	0.26	+0.8
2,706,593	+		LRK54_RS12165	0.26	-0.4
2,706,593	+		LRK54_RS12165	0.26	+1.4
2,706,593	+		LRK54_RS12165	0.26	-0.6
2,706,593	+		LRK54_RS12165	0.26	+1.8
2,706,593	+		LRK54_RS12165	0.26	+0.9
2,706,593	+		LRK54_RS12165	0.26	+0.6
2,706,594	-		LRK54_RS12165	0.26	+0.3
2,706,594	-		LRK54_RS12165	0.26	-1.5
2,706,594	-		LRK54_RS12165	0.26	+0.5
2,706,594	-		LRK54_RS12165	0.26	-0.4
2,706,594	-		LRK54_RS12165	0.26	+0.5
2,706,594	-		LRK54_RS12165	0.26	-0.1
2,706,594	-		LRK54_RS12165	0.26	-0.8
2,706,594	-		LRK54_RS12165	0.26	-0.0
2,706,788	+		LRK54_RS12165	0.41	+0.0
2,706,788	+		LRK54_RS12165	0.41	+1.0
2,706,788	+		LRK54_RS12165	0.41	+1.2
2,706,788	+		LRK54_RS12165	0.41	+0.8
2,706,788	+		LRK54_RS12165	0.41	+0.2
2,706,788	+		LRK54_RS12165	0.41	+0.2
2,706,788	+		LRK54_RS12165	0.41	+0.4
2,706,788	+		LRK54_RS12165	0.41	+0.8
2,706,789	-		LRK54_RS12165	0.41	-1.6
2,706,789	-		LRK54_RS12165	0.41	+1.8
2,706,789	-		LRK54_RS12165	0.41	+1.1
2,706,789	-		LRK54_RS12165	0.41	+1.2
2,706,789	-		LRK54_RS12165	0.41	+0.6
2,706,789	-		LRK54_RS12165	0.41	+0.6
2,706,812	+		LRK54_RS12165	0.43	+0.4
2,706,813	-		LRK54_RS12165	0.43	+1.0
2,706,854	+		LRK54_RS12165	0.46	+0.6
2,707,022	+		LRK54_RS12165	0.59	-0.6
2,707,022	+		LRK54_RS12165	0.59	+0.6
2,707,022	+		LRK54_RS12165	0.59	+0.6
2,707,022	+		LRK54_RS12165	0.59	+1.0
2,707,022	+		LRK54_RS12165	0.59	+0.6
2,707,022	+		LRK54_RS12165	0.59	-0.5
2,707,022	+		LRK54_RS12165	0.59	+0.2
2,707,022	+		LRK54_RS12165	0.59	+0.3
2,707,022	+		LRK54_RS12165	0.59	+0.3
2,707,022	+		LRK54_RS12165	0.59	+1.1
2,707,022	+		LRK54_RS12165	0.59	+0.2
2,707,022	+		LRK54_RS12165	0.59	-0.6
2,707,022	+		LRK54_RS12165	0.59	+1.5
2,707,022	+		LRK54_RS12165	0.59	+2.8
2,707,022	+		LRK54_RS12165	0.59	-0.2
2,707,022	+		LRK54_RS12165	0.59	+0.3
2,707,023	-		LRK54_RS12165	0.59	+0.2
2,707,023	-		LRK54_RS12165	0.59	+0.8
2,707,023	-		LRK54_RS12165	0.59	+1.1
2,707,023	-		LRK54_RS12165	0.59	+0.4
2,707,023	-		LRK54_RS12165	0.59	+0.4
2,707,023	-		LRK54_RS12165	0.59	+1.8
2,707,023	-		LRK54_RS12165	0.59	+1.8
2,707,023	-		LRK54_RS12165	0.59	+0.5