Experiment: R2A with Ferric chloride 1.5625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS00315 and LRK54_RS00320 overlap by 4 nucleotides LRK54_RS00320 and LRK54_RS00325 are separated by 3 nucleotides
LRK54_RS00315: LRK54_RS00315 - single-stranded-DNA-specific exonuclease RecJ, at 71,304 to 73,016
_RS00315
LRK54_RS00320: LRK54_RS00320 - phosphoglycerate mutase, at 73,013 to 73,933
_RS00320
LRK54_RS00325: LRK54_RS00325 - ATP-binding cassette domain-containing protein, at 73,937 to 75,958
_RS00325
Position (kb) 73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.430 kb on + strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.431 kb on - strand, within LRK54_RS00315 at 72.673 kb on + strand, within LRK54_RS00315 at 72.674 kb on - strand, within LRK54_RS00315 at 72.703 kb on + strand, within LRK54_RS00315 at 72.703 kb on + strand, within LRK54_RS00315 at 72.704 kb on - strand, within LRK54_RS00315 at 72.778 kb on + strand, within LRK54_RS00315 at 72.778 kb on + strand, within LRK54_RS00315 at 72.778 kb on + strand, within LRK54_RS00315 at 72.779 kb on - strand, within LRK54_RS00315 at 72.779 kb on - strand, within LRK54_RS00315 at 72.779 kb on - strand, within LRK54_RS00315 at 72.779 kb on - strand, within LRK54_RS00315 at 72.779 kb on - strand, within LRK54_RS00315 at 72.779 kb on - strand, within LRK54_RS00315 at 72.912 kb on + strand at 72.912 kb on + strand at 72.912 kb on + strand at 72.912 kb on + strand at 72.913 kb on - strand at 72.913 kb on - strand at 72.913 kb on - strand at 72.913 kb on - strand at 72.913 kb on - strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.928 kb on + strand at 72.929 kb on - strand at 72.929 kb on - strand at 72.929 kb on - strand at 72.929 kb on - strand at 72.929 kb on - strand at 72.929 kb on - strand at 72.929 kb on - strand at 72.929 kb on - strand at 72.929 kb on - strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.601 kb on + strand, within LRK54_RS00320 at 73.601 kb on + strand, within LRK54_RS00320 at 73.602 kb on - strand, within LRK54_RS00320 at 73.685 kb on + strand, within LRK54_RS00320 at 73.686 kb on - strand, within LRK54_RS00320 at 73.686 kb on - strand, within LRK54_RS00320 at 73.812 kb on + strand, within LRK54_RS00320 at 73.813 kb on - strand, within LRK54_RS00320 at 73.813 kb on - strand, within LRK54_RS00320 at 73.813 kb on - strand, within LRK54_RS00320 at 73.813 kb on - strand, within LRK54_RS00320 at 73.813 kb on - strand, within LRK54_RS00320 at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.052 kb on + strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.053 kb on - strand at 74.112 kb on + strand at 74.113 kb on + strand at 74.113 kb on + strand at 74.113 kb on + strand at 74.113 kb on + strand at 74.113 kb on + strand at 74.113 kb on + strand at 74.113 kb on + strand at 74.113 kb on + strand at 74.114 kb on - strand at 74.114 kb on - strand at 74.114 kb on - strand at 74.114 kb on - strand at 74.114 kb on - strand at 74.277 kb on + strand, within LRK54_RS00325 at 74.277 kb on + strand, within LRK54_RS00325 at 74.277 kb on + strand, within LRK54_RS00325 at 74.277 kb on + strand, within LRK54_RS00325 at 74.277 kb on + strand, within LRK54_RS00325 at 74.278 kb on - strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.666 kb on + strand, within LRK54_RS00325 at 74.667 kb on - strand, within LRK54_RS00325 at 74.667 kb on - strand, within LRK54_RS00325 at 74.667 kb on - strand, within LRK54_RS00325 at 74.667 kb on - strand, within LRK54_RS00325 at 74.667 kb on - strand, within LRK54_RS00325 at 74.685 kb on + strand, within LRK54_RS00325 at 74.685 kb on + strand, within LRK54_RS00325 at 74.685 kb on + strand, within LRK54_RS00325 at 74.685 kb on + strand, within LRK54_RS00325 at 74.685 kb on + strand, within LRK54_RS00325 at 74.686 kb on - strand, within LRK54_RS00325 at 74.686 kb on - strand, within LRK54_RS00325 at 74.687 kb on - strand, within LRK54_RS00325 at 74.818 kb on + strand, within LRK54_RS00325 at 74.818 kb on + strand, within LRK54_RS00325 at 74.818 kb on + strand, within LRK54_RS00325 at 74.818 kb on + strand, within LRK54_RS00325 at 74.819 kb on - strand, within LRK54_RS00325 at 74.819 kb on - strand, within LRK54_RS00325 at 74.819 kb on - strand, within LRK54_RS00325 at 74.819 kb on - strand, within LRK54_RS00325 at 74.819 kb on - strand, within LRK54_RS00325 at 74.819 kb on - strand, within LRK54_RS00325 at 74.819 kb on - strand, within LRK54_RS00325
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Ferric chloride 1.5625 mM remove 72,430 + LRK54_RS00315 0.66 +0.9 72,430 + LRK54_RS00315 0.66 -1.8 72,430 + LRK54_RS00315 0.66 -0.3 72,430 + LRK54_RS00315 0.66 +0.3 72,430 + LRK54_RS00315 0.66 +0.2 72,430 + LRK54_RS00315 0.66 -1.1 72,430 + LRK54_RS00315 0.66 -1.3 72,430 + LRK54_RS00315 0.66 +1.5 72,430 + LRK54_RS00315 0.66 +0.0 72,430 + LRK54_RS00315 0.66 -1.3 72,430 + LRK54_RS00315 0.66 -2.6 72,430 + LRK54_RS00315 0.66 -0.1 72,430 + LRK54_RS00315 0.66 +0.5 72,430 + LRK54_RS00315 0.66 -0.1 72,430 + LRK54_RS00315 0.66 +1.1 72,430 + LRK54_RS00315 0.66 -0.0 72,430 + LRK54_RS00315 0.66 -0.1 72,430 + LRK54_RS00315 0.66 +1.5 72,430 + LRK54_RS00315 0.66 +0.8 72,430 + LRK54_RS00315 0.66 -0.1 72,430 + LRK54_RS00315 0.66 +1.0 72,430 + LRK54_RS00315 0.66 -0.1 72,430 + LRK54_RS00315 0.66 -1.1 72,430 + LRK54_RS00315 0.66 -0.4 72,430 + LRK54_RS00315 0.66 +1.3 72,430 + LRK54_RS00315 0.66 +0.4 72,430 + LRK54_RS00315 0.66 -0.2 72,430 + LRK54_RS00315 0.66 +0.2 72,430 + LRK54_RS00315 0.66 -2.3 72,430 + LRK54_RS00315 0.66 +0.1 72,430 + LRK54_RS00315 0.66 -1.0 72,430 + LRK54_RS00315 0.66 +1.1 72,431 - LRK54_RS00315 0.66 +0.2 72,431 - LRK54_RS00315 0.66 +0.9 72,431 - LRK54_RS00315 0.66 +0.2 72,431 - LRK54_RS00315 0.66 +0.3 72,431 - LRK54_RS00315 0.66 +1.9 72,431 - LRK54_RS00315 0.66 -0.2 72,431 - LRK54_RS00315 0.66 +0.9 72,431 - LRK54_RS00315 0.66 -2.1 72,431 - LRK54_RS00315 0.66 -1.2 72,431 - LRK54_RS00315 0.66 -0.7 72,431 - LRK54_RS00315 0.66 +0.4 72,431 - LRK54_RS00315 0.66 -0.4 72,431 - LRK54_RS00315 0.66 +0.6 72,431 - LRK54_RS00315 0.66 +0.3 72,431 - LRK54_RS00315 0.66 -0.1 72,431 - LRK54_RS00315 0.66 -0.4 72,431 - LRK54_RS00315 0.66 +1.3 72,431 - LRK54_RS00315 0.66 +0.9 72,431 - LRK54_RS00315 0.66 +0.0 72,431 - LRK54_RS00315 0.66 +0.0 72,431 - LRK54_RS00315 0.66 -1.4 72,431 - LRK54_RS00315 0.66 -0.9 72,431 - LRK54_RS00315 0.66 +0.5 72,431 - LRK54_RS00315 0.66 -0.0 72,431 - LRK54_RS00315 0.66 -0.4 72,431 - LRK54_RS00315 0.66 +0.3 72,431 - LRK54_RS00315 0.66 +0.3 72,431 - LRK54_RS00315 0.66 +0.4 72,431 - LRK54_RS00315 0.66 +0.6 72,431 - LRK54_RS00315 0.66 +1.6 72,431 - LRK54_RS00315 0.66 -0.1 72,431 - LRK54_RS00315 0.66 -0.8 72,431 - LRK54_RS00315 0.66 -0.0 72,673 + LRK54_RS00315 0.80 -0.7 72,674 - LRK54_RS00315 0.80 -0.6 72,703 + LRK54_RS00315 0.82 -1.3 72,703 + LRK54_RS00315 0.82 -0.7 72,704 - LRK54_RS00315 0.82 +1.1 72,778 + LRK54_RS00315 0.86 +0.3 72,778 + LRK54_RS00315 0.86 +0.5 72,778 + LRK54_RS00315 0.86 -0.2 72,779 - LRK54_RS00315 0.86 +0.3 72,779 - LRK54_RS00315 0.86 -2.4 72,779 - LRK54_RS00315 0.86 +0.1 72,779 - LRK54_RS00315 0.86 +0.5 72,779 - LRK54_RS00315 0.86 +0.2 72,779 - LRK54_RS00315 0.86 -1.6 72,912 + +0.9 72,912 + -0.1 72,912 + +0.2 72,912 + +1.7 72,913 - +0.9 72,913 - -0.1 72,913 - +0.3 72,913 - +1.9 72,913 - -0.7 72,928 + +0.3 72,928 + -0.9 72,928 + -0.1 72,928 + +0.9 72,928 + +3.2 72,928 + +0.2 72,928 + -0.5 72,928 + -2.2 72,928 + +1.1 72,928 + -0.9 72,928 + +0.8 72,928 + +3.3 72,928 + +0.5 72,928 + -0.1 72,929 - +0.2 72,929 - +0.2 72,929 - -0.3 72,929 - +1.9 72,929 - -0.8 72,929 - +1.3 72,929 - -0.4 72,929 - -1.6 72,929 - +0.3 73,008 + -1.7 73,008 + +0.6 73,008 + +0.3 73,008 + +1.1 73,008 + -0.7 73,008 + +0.1 73,008 + +0.7 73,008 + +0.2 73,008 + -1.2 73,009 - -0.9 73,009 - +0.3 73,009 - -0.1 73,009 - +0.4 73,009 - -1.8 73,601 + LRK54_RS00320 0.64 -0.1 73,601 + LRK54_RS00320 0.64 +0.3 73,602 - LRK54_RS00320 0.64 -0.1 73,685 + LRK54_RS00320 0.73 -0.4 73,686 - LRK54_RS00320 0.73 -0.7 73,686 - LRK54_RS00320 0.73 -1.7 73,812 + LRK54_RS00320 0.87 +0.9 73,813 - LRK54_RS00320 0.87 -0.1 73,813 - LRK54_RS00320 0.87 -2.5 73,813 - LRK54_RS00320 0.87 -0.5 73,813 - LRK54_RS00320 0.87 -2.2 73,813 - LRK54_RS00320 0.87 +0.3 74,052 + -0.9 74,052 + +0.2 74,052 + -0.9 74,052 + +2.5 74,052 + +2.7 74,052 + +0.6 74,052 + -0.1 74,052 + +0.9 74,052 + -0.1 74,052 + +0.6 74,052 + +0.4 74,052 + -1.0 74,052 + -0.9 74,052 + -1.6 74,052 + -0.7 74,052 + +0.2 74,052 + -1.0 74,052 + -0.2 74,052 + -0.0 74,052 + +0.2 74,052 + -0.2 74,052 + -0.2 74,052 + -0.1 74,052 + -0.6 74,052 + +0.6 74,053 - -0.8 74,053 - -3.3 74,053 - -0.7 74,053 - +0.2 74,053 - -0.4 74,053 - +1.2 74,053 - -0.2 74,053 - -0.8 74,053 - +0.4 74,053 - -0.2 74,053 - +0.5 74,053 - +1.1 74,053 - +0.8 74,053 - +1.4 74,053 - -0.6 74,053 - +0.9 74,053 - +1.5 74,053 - +0.5 74,053 - +0.6 74,053 - -1.3 74,053 - +0.9 74,053 - +1.1 74,053 - -0.1 74,053 - -0.9 74,053 - +0.5 74,053 - -0.1 74,053 - +1.3 74,112 + -1.7 74,113 + -1.7 74,113 + -1.1 74,113 + -0.6 74,113 + +0.3 74,113 + -0.1 74,113 + -0.5 74,113 + -0.9 74,113 + -0.7 74,114 - +0.3 74,114 - -1.1 74,114 - -0.8 74,114 - +0.6 74,114 - +0.7 74,277 + LRK54_RS00325 0.17 +0.7 74,277 + LRK54_RS00325 0.17 -0.9 74,277 + LRK54_RS00325 0.17 +0.6 74,277 + LRK54_RS00325 0.17 +0.7 74,277 + LRK54_RS00325 0.17 -1.1 74,278 - LRK54_RS00325 0.17 -0.4 74,666 + LRK54_RS00325 0.36 +0.9 74,666 + LRK54_RS00325 0.36 +0.7 74,666 + LRK54_RS00325 0.36 +1.6 74,666 + LRK54_RS00325 0.36 -1.1 74,666 + LRK54_RS00325 0.36 +2.6 74,666 + LRK54_RS00325 0.36 -0.4 74,666 + LRK54_RS00325 0.36 +0.3 74,666 + LRK54_RS00325 0.36 -0.1 74,666 + LRK54_RS00325 0.36 -0.7 74,666 + LRK54_RS00325 0.36 -1.1 74,667 - LRK54_RS00325 0.36 -0.9 74,667 - LRK54_RS00325 0.36 -0.3 74,667 - LRK54_RS00325 0.36 -1.0 74,667 - LRK54_RS00325 0.36 +0.9 74,667 - LRK54_RS00325 0.36 -0.7 74,685 + LRK54_RS00325 0.37 -0.7 74,685 + LRK54_RS00325 0.37 +0.3 74,685 + LRK54_RS00325 0.37 -0.4 74,685 + LRK54_RS00325 0.37 -2.0 74,685 + LRK54_RS00325 0.37 -0.1 74,686 - LRK54_RS00325 0.37 +0.3 74,686 - LRK54_RS00325 0.37 -0.4 74,687 - LRK54_RS00325 0.37 -0.1 74,818 + LRK54_RS00325 0.44 -0.5 74,818 + LRK54_RS00325 0.44 +0.3 74,818 + LRK54_RS00325 0.44 -0.3 74,818 + LRK54_RS00325 0.44 -0.8 74,819 - LRK54_RS00325 0.44 -0.7 74,819 - LRK54_RS00325 0.44 -0.9 74,819 - LRK54_RS00325 0.44 -0.7 74,819 - LRK54_RS00325 0.44 -0.2 74,819 - LRK54_RS00325 0.44 -1.1 74,819 - LRK54_RS00325 0.44 +0.8 74,819 - LRK54_RS00325 0.44 +0.5
Or see this region's nucleotide sequence