Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28405
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
6,604,904 | + | AO356_28400 | 0.19 | +0.3 | |
6,604,904 | + | AO356_28400 | 0.19 | -0.5 | |
6,604,905 | - | AO356_28400 | 0.19 | -0.9 | |
6,605,282 | + | AO356_28400 | 0.53 | -0.2 | |
6,605,283 | - | AO356_28400 | 0.53 | +0.5 | |
6,605,297 | + | AO356_28400 | 0.55 | +0.6 | |
6,605,604 | - | AO356_28400 | 0.83 | -0.1 | |
6,605,693 | + | -0.1 | |||
6,605,693 | + | +0.4 | |||
6,605,694 | - | +0.4 | |||
6,605,694 | - | -0.4 | |||
6,605,800 | + | +0.4 | |||
6,605,963 | + | AO356_28405 | 0.23 | -0.1 | |
6,606,076 | + | AO356_28405 | 0.43 | -0.2 | |
6,606,135 | - | AO356_28405 | 0.54 | -1.2 | |
6,606,135 | - | AO356_28405 | 0.54 | -2.4 | |
6,606,401 | + | -0.3 | |||
6,606,767 | + | -0.4 | |||
6,606,768 | - | +1.0 | |||
6,606,826 | - | +0.1 | |||
6,606,972 | + | AO356_28410 | 0.16 | +0.2 | |
6,607,107 | - | AO356_28410 | 0.27 | -0.0 | |
6,607,252 | - | AO356_28410 | 0.38 | -0.6 | |
6,607,269 | - | AO356_28410 | 0.40 | +0.2 | |
6,607,293 | + | AO356_28410 | 0.42 | +0.3 | |
6,607,293 | + | AO356_28410 | 0.42 | +0.9 | |
6,607,294 | - | AO356_28410 | 0.42 | +1.5 | |
6,607,294 | - | AO356_28410 | 0.42 | -1.3 |
Or see this region's nucleotide sequence