Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27045 and AO356_27050 are separated by 193 nucleotides AO356_27050 and AO356_27055 are separated by 93 nucleotides
AO356_27045: AO356_27045 - MFS transporter, at 6,164,033 to 6,165,490
_27045
AO356_27050: AO356_27050 - hypothetical protein, at 6,165,684 to 6,165,962
_27050
AO356_27055: AO356_27055 - DNA helicase UvrD, at 6,166,056 to 6,168,524
_27055
Position (kb)
6165
6166 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6164.708 kb on + strand, within AO356_27045 at 6164.709 kb on - strand, within AO356_27045 at 6164.767 kb on - strand, within AO356_27045 at 6164.933 kb on + strand, within AO356_27045 at 6164.933 kb on + strand, within AO356_27045 at 6164.933 kb on + strand, within AO356_27045 at 6164.933 kb on + strand, within AO356_27045 at 6164.934 kb on - strand, within AO356_27045 at 6164.934 kb on - strand, within AO356_27045 at 6164.934 kb on - strand, within AO356_27045 at 6164.934 kb on - strand, within AO356_27045 at 6164.934 kb on - strand, within AO356_27045 at 6164.934 kb on - strand, within AO356_27045 at 6165.160 kb on - strand, within AO356_27045 at 6165.489 kb on - strand at 6165.489 kb on - strand at 6165.595 kb on - strand at 6165.614 kb on - strand at 6165.689 kb on + strand at 6165.710 kb on + strand at 6165.710 kb on + strand at 6165.710 kb on + strand at 6165.711 kb on - strand at 6165.711 kb on - strand at 6165.805 kb on + strand, within AO356_27050 at 6165.806 kb on - strand, within AO356_27050 at 6165.892 kb on + strand, within AO356_27050 at 6165.892 kb on + strand, within AO356_27050 at 6165.977 kb on + strand at 6165.978 kb on - strand at 6165.978 kb on - strand at 6166.035 kb on + strand at 6166.035 kb on + strand at 6166.035 kb on + strand at 6166.036 kb on - strand at 6166.036 kb on - strand at 6166.039 kb on - strand at 6166.110 kb on - strand at 6166.110 kb on - strand at 6166.110 kb on - strand at 6166.162 kb on + strand at 6166.162 kb on + strand at 6166.163 kb on - strand at 6166.163 kb on - strand at 6166.163 kb on - strand at 6166.201 kb on + strand at 6166.240 kb on + strand at 6166.283 kb on - strand at 6166.297 kb on + strand at 6166.332 kb on + strand, within AO356_27055 at 6166.672 kb on + strand, within AO356_27055 at 6166.673 kb on - strand, within AO356_27055 at 6166.738 kb on + strand, within AO356_27055 at 6166.739 kb on - strand, within AO356_27055 at 6166.739 kb on - strand, within AO356_27055 at 6166.739 kb on - strand, within AO356_27055 at 6166.739 kb on - strand, within AO356_27055 at 6166.739 kb on - strand, within AO356_27055 at 6166.765 kb on + strand, within AO356_27055 at 6166.765 kb on + strand, within AO356_27055 at 6166.765 kb on + strand, within AO356_27055 at 6166.765 kb on + strand, within AO356_27055 at 6166.765 kb on + strand, within AO356_27055 at 6166.765 kb on + strand, within AO356_27055 at 6166.766 kb on - strand, within AO356_27055 at 6166.896 kb on + strand, within AO356_27055 at 6166.897 kb on - strand, within AO356_27055
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 6,164,708 + AO356_27045 0.46 -0.6 6,164,709 - AO356_27045 0.46 -0.9 6,164,767 - AO356_27045 0.50 -0.4 6,164,933 + AO356_27045 0.62 +0.7 6,164,933 + AO356_27045 0.62 +0.0 6,164,933 + AO356_27045 0.62 +0.7 6,164,933 + AO356_27045 0.62 +0.0 6,164,934 - AO356_27045 0.62 +0.5 6,164,934 - AO356_27045 0.62 +0.5 6,164,934 - AO356_27045 0.62 -0.3 6,164,934 - AO356_27045 0.62 -0.2 6,164,934 - AO356_27045 0.62 +0.8 6,164,934 - AO356_27045 0.62 +0.2 6,165,160 - AO356_27045 0.77 -1.1 6,165,489 - +0.3 6,165,489 - -0.9 6,165,595 - +0.4 6,165,614 - +2.2 6,165,689 + +0.5 6,165,710 + +1.1 6,165,710 + -0.4 6,165,710 + +0.6 6,165,711 - +0.2 6,165,711 - -0.1 6,165,805 + AO356_27050 0.43 +1.5 6,165,806 - AO356_27050 0.44 +0.5 6,165,892 + AO356_27050 0.75 +0.3 6,165,892 + AO356_27050 0.75 +1.0 6,165,977 + -1.1 6,165,978 - +0.1 6,165,978 - -0.1 6,166,035 + -0.6 6,166,035 + +0.1 6,166,035 + +0.1 6,166,036 - -0.1 6,166,036 - -0.8 6,166,039 - +0.5 6,166,110 - -0.6 6,166,110 - -1.8 6,166,110 - +0.5 6,166,162 + -0.0 6,166,162 + +0.1 6,166,163 - +1.0 6,166,163 - -0.3 6,166,163 - -1.2 6,166,201 + +0.0 6,166,240 + -0.9 6,166,283 - -0.7 6,166,297 + +0.5 6,166,332 + AO356_27055 0.11 -0.3 6,166,672 + AO356_27055 0.25 +0.1 6,166,673 - AO356_27055 0.25 -0.9 6,166,738 + AO356_27055 0.28 -0.6 6,166,739 - AO356_27055 0.28 -0.4 6,166,739 - AO356_27055 0.28 +0.6 6,166,739 - AO356_27055 0.28 -0.4 6,166,739 - AO356_27055 0.28 +1.4 6,166,739 - AO356_27055 0.28 -0.7 6,166,765 + AO356_27055 0.29 -0.6 6,166,765 + AO356_27055 0.29 +0.5 6,166,765 + AO356_27055 0.29 -0.3 6,166,765 + AO356_27055 0.29 -0.5 6,166,765 + AO356_27055 0.29 -0.4 6,166,765 + AO356_27055 0.29 +0.7 6,166,766 - AO356_27055 0.29 +0.9 6,166,896 + AO356_27055 0.34 -0.2 6,166,897 - AO356_27055 0.34 -0.1
Or see this region's nucleotide sequence