Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22270 and AO356_22275 are separated by 320 nucleotides AO356_22275 and AO356_22280 are separated by 96 nucleotides
AO356_22270: AO356_22270 - hypothetical protein, at 4,980,138 to 4,981,103
_22270
AO356_22275: AO356_22275 - histidine kinase, at 4,981,424 to 4,982,554
_22275
AO356_22280: AO356_22280 - gluconolactonase, at 4,982,651 to 4,983,742
_22280
Position (kb) 4981
4982
4983 Strain fitness (log2 ratio) -1
0
1
2 at 4980.481 kb on - strand, within AO356_22270 at 4980.654 kb on + strand, within AO356_22270 at 4980.811 kb on + strand, within AO356_22270 at 4980.921 kb on + strand, within AO356_22270 at 4981.367 kb on + strand at 4981.367 kb on + strand at 4981.368 kb on - strand at 4981.454 kb on - strand at 4981.762 kb on + strand, within AO356_22275 at 4981.762 kb on + strand, within AO356_22275 at 4981.851 kb on - strand, within AO356_22275 at 4982.001 kb on + strand, within AO356_22275 at 4982.001 kb on + strand, within AO356_22275 at 4982.002 kb on - strand, within AO356_22275 at 4982.003 kb on + strand, within AO356_22275 at 4982.003 kb on + strand, within AO356_22275 at 4982.003 kb on + strand, within AO356_22275 at 4982.003 kb on + strand, within AO356_22275 at 4982.003 kb on + strand, within AO356_22275 at 4982.003 kb on + strand, within AO356_22275 at 4982.003 kb on + strand, within AO356_22275 at 4982.004 kb on - strand, within AO356_22275 at 4982.004 kb on - strand, within AO356_22275 at 4982.004 kb on - strand, within AO356_22275 at 4982.004 kb on - strand, within AO356_22275 at 4982.004 kb on - strand, within AO356_22275 at 4982.147 kb on + strand, within AO356_22275 at 4982.394 kb on + strand, within AO356_22275 at 4982.394 kb on + strand, within AO356_22275 at 4982.394 kb on + strand, within AO356_22275 at 4982.394 kb on + strand, within AO356_22275 at 4982.394 kb on + strand, within AO356_22275 at 4982.394 kb on + strand, within AO356_22275 at 4982.395 kb on - strand, within AO356_22275 at 4982.395 kb on - strand, within AO356_22275 at 4982.466 kb on + strand at 4982.533 kb on + strand at 4982.533 kb on + strand at 4982.534 kb on - strand at 4982.534 kb on - strand at 4982.534 kb on - strand at 4982.535 kb on + strand at 4982.608 kb on + strand at 4982.629 kb on + strand at 4982.632 kb on + strand at 4982.633 kb on - strand at 4982.636 kb on + strand at 4982.637 kb on - strand at 4983.233 kb on + strand, within AO356_22280 at 4983.233 kb on + strand, within AO356_22280 at 4983.233 kb on + strand, within AO356_22280 at 4983.234 kb on - strand, within AO356_22280 at 4983.234 kb on - strand, within AO356_22280 at 4983.276 kb on - strand, within AO356_22280 at 4983.276 kb on - strand, within AO356_22280 at 4983.371 kb on + strand, within AO356_22280 at 4983.371 kb on + strand, within AO356_22280 at 4983.372 kb on - strand, within AO356_22280
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,980,481 - AO356_22270 0.36 +0.1 4,980,654 + AO356_22270 0.53 +0.6 4,980,811 + AO356_22270 0.70 +0.4 4,980,921 + AO356_22270 0.81 +0.1 4,981,367 + +0.0 4,981,367 + +0.2 4,981,368 - +0.0 4,981,454 - +0.9 4,981,762 + AO356_22275 0.30 +0.8 4,981,762 + AO356_22275 0.30 +0.4 4,981,851 - AO356_22275 0.38 -0.4 4,982,001 + AO356_22275 0.51 -0.2 4,982,001 + AO356_22275 0.51 +0.0 4,982,002 - AO356_22275 0.51 -1.0 4,982,003 + AO356_22275 0.51 -0.2 4,982,003 + AO356_22275 0.51 +0.3 4,982,003 + AO356_22275 0.51 +0.0 4,982,003 + AO356_22275 0.51 -0.8 4,982,003 + AO356_22275 0.51 +0.6 4,982,003 + AO356_22275 0.51 +0.6 4,982,003 + AO356_22275 0.51 +0.2 4,982,004 - AO356_22275 0.51 +0.9 4,982,004 - AO356_22275 0.51 -0.5 4,982,004 - AO356_22275 0.51 -1.5 4,982,004 - AO356_22275 0.51 +0.8 4,982,004 - AO356_22275 0.51 +1.2 4,982,147 + AO356_22275 0.64 -1.0 4,982,394 + AO356_22275 0.86 -0.4 4,982,394 + AO356_22275 0.86 +0.3 4,982,394 + AO356_22275 0.86 -0.6 4,982,394 + AO356_22275 0.86 -0.5 4,982,394 + AO356_22275 0.86 +0.2 4,982,394 + AO356_22275 0.86 +0.5 4,982,395 - AO356_22275 0.86 +1.9 4,982,395 - AO356_22275 0.86 -0.4 4,982,466 + +0.4 4,982,533 + -1.6 4,982,533 + -0.2 4,982,534 - -0.6 4,982,534 - +0.3 4,982,534 - -0.1 4,982,535 + +0.0 4,982,608 + +0.5 4,982,629 + +0.0 4,982,632 + +0.5 4,982,633 - -0.2 4,982,636 + +0.1 4,982,637 - +0.2 4,983,233 + AO356_22280 0.53 +0.2 4,983,233 + AO356_22280 0.53 +0.4 4,983,233 + AO356_22280 0.53 +0.8 4,983,234 - AO356_22280 0.53 +0.0 4,983,234 - AO356_22280 0.53 +0.4 4,983,276 - AO356_22280 0.57 +0.0 4,983,276 - AO356_22280 0.57 +0.2 4,983,371 + AO356_22280 0.66 +0.3 4,983,371 + AO356_22280 0.66 +0.3 4,983,372 - AO356_22280 0.66 +1.6
Or see this region's nucleotide sequence