Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_22015

Experiment: LB

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntAO356_22010 and AO356_22015 are separated by 7 nucleotidesAO356_22015 and AO356_22020 are separated by 39 nucleotides AO356_22010: AO356_22010 - NADH:ubiquinone oxidoreductase subunit N, at 4,924,957 to 4,926,420 _22010 AO356_22015: AO356_22015 - NADH:ubiquinone oxidoreductase subunit M, at 4,926,428 to 4,927,960 _22015 AO356_22020: AO356_22020 - NADH-quinone oxidoreductase subunit L, at 4,928,000 to 4,929,853 _22020 Position (kb) 4926 4927 4928Strain fitness (log2 ratio) -1 0 1at 4926.963 kb on + strand, within AO356_22015at 4927.999 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction LB
remove
4,926,963 + AO356_22015 0.35 -0.0
4,927,999 - -0.0

Or see this region's nucleotide sequence