Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11740 and AO356_11745 are separated by 327 nucleotides AO356_11745 and AO356_11750 overlap by 8 nucleotides
AO356_11740: AO356_11740 - glucosamine--fructose-6-phosphate aminotransferase, at 2,658,466 to 2,660,298
_11740
AO356_11745: AO356_11745 - hypothetical protein, at 2,660,626 to 2,661,084
_11745
AO356_11750: AO356_11750 - toxin HipA, at 2,661,077 to 2,662,333
_11750
Position (kb)
2660
2661
2662 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.337 kb on + strand at 2660.337 kb on + strand at 2660.337 kb on + strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.356 kb on + strand at 2660.357 kb on - strand at 2660.366 kb on - strand at 2660.399 kb on + strand at 2660.400 kb on - strand at 2660.416 kb on + strand at 2660.416 kb on + strand at 2660.416 kb on + strand at 2660.417 kb on - strand at 2660.417 kb on - strand at 2660.417 kb on - strand at 2660.813 kb on - strand, within AO356_11745 at 2660.813 kb on - strand, within AO356_11745 at 2661.065 kb on + strand at 2661.065 kb on + strand at 2661.098 kb on + strand at 2661.172 kb on + strand at 2661.173 kb on - strand at 2661.173 kb on - strand at 2661.248 kb on + strand, within AO356_11750 at 2661.249 kb on - strand, within AO356_11750 at 2661.292 kb on - strand, within AO356_11750 at 2661.369 kb on + strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.688 kb on + strand, within AO356_11750 at 2661.688 kb on + strand, within AO356_11750 at 2661.689 kb on - strand, within AO356_11750 at 2661.691 kb on + strand, within AO356_11750 at 2661.691 kb on + strand, within AO356_11750 at 2661.691 kb on + strand, within AO356_11750 at 2661.691 kb on + strand, within AO356_11750 at 2661.692 kb on - strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.786 kb on - strand, within AO356_11750 at 2661.786 kb on - strand, within AO356_11750 at 2661.797 kb on + strand, within AO356_11750 at 2661.797 kb on + strand, within AO356_11750 at 2661.798 kb on - strand, within AO356_11750 at 2661.815 kb on - strand, within AO356_11750 at 2661.815 kb on - strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.918 kb on - strand, within AO356_11750 at 2661.918 kb on - strand, within AO356_11750 at 2661.918 kb on - strand, within AO356_11750 at 2661.918 kb on - strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2662.032 kb on + strand, within AO356_11750 at 2662.032 kb on + strand, within AO356_11750 at 2662.032 kb on + strand, within AO356_11750 at 2662.032 kb on + strand, within AO356_11750 at 2662.033 kb on - strand, within AO356_11750 at 2662.033 kb on - strand, within AO356_11750 at 2662.033 kb on - strand, within AO356_11750 at 2662.050 kb on + strand, within AO356_11750 at 2662.050 kb on + strand, within AO356_11750 at 2662.050 kb on + strand, within AO356_11750 at 2662.051 kb on - strand, within AO356_11750
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,660,333 + -0.2 2,660,333 + -0.5 2,660,333 + -0.7 2,660,333 + -0.4 2,660,333 + -0.4 2,660,333 + +0.2 2,660,333 + +0.4 2,660,333 + -1.0 2,660,334 - +0.3 2,660,334 - +0.5 2,660,334 - +0.3 2,660,334 - -0.6 2,660,334 - -0.7 2,660,334 - -0.5 2,660,334 - -0.2 2,660,334 - -1.0 2,660,334 - -0.2 2,660,334 - +0.0 2,660,334 - +0.3 2,660,334 - +0.3 2,660,334 - -1.1 2,660,337 + -0.9 2,660,337 + +0.5 2,660,337 + -0.4 2,660,338 - +0.4 2,660,338 - +0.3 2,660,338 - -0.0 2,660,338 - -1.0 2,660,356 + -0.6 2,660,357 - +0.4 2,660,366 - +0.4 2,660,399 + +0.2 2,660,400 - +0.2 2,660,416 + -0.7 2,660,416 + -0.2 2,660,416 + +0.5 2,660,417 - -0.4 2,660,417 - +0.9 2,660,417 - +0.3 2,660,813 - AO356_11745 0.41 +0.2 2,660,813 - AO356_11745 0.41 -1.1 2,661,065 + -0.4 2,661,065 + -0.3 2,661,098 + -0.3 2,661,172 + +0.2 2,661,173 - +0.8 2,661,173 - -0.7 2,661,248 + AO356_11750 0.14 +0.1 2,661,249 - AO356_11750 0.14 +0.3 2,661,292 - AO356_11750 0.17 -1.1 2,661,369 + AO356_11750 0.23 +0.4 2,661,402 - AO356_11750 0.26 +1.4 2,661,402 - AO356_11750 0.26 +0.3 2,661,402 - AO356_11750 0.26 +0.3 2,661,402 - AO356_11750 0.26 -0.1 2,661,402 - AO356_11750 0.26 +0.4 2,661,402 - AO356_11750 0.26 +0.5 2,661,402 - AO356_11750 0.26 +0.4 2,661,645 + AO356_11750 0.45 +0.3 2,661,645 + AO356_11750 0.45 -1.4 2,661,645 + AO356_11750 0.45 +0.0 2,661,645 + AO356_11750 0.45 +0.3 2,661,645 + AO356_11750 0.45 -0.6 2,661,645 + AO356_11750 0.45 +0.6 2,661,646 - AO356_11750 0.45 +1.0 2,661,646 - AO356_11750 0.45 +0.3 2,661,646 - AO356_11750 0.45 -0.4 2,661,646 - AO356_11750 0.45 +0.4 2,661,646 - AO356_11750 0.45 -0.8 2,661,646 - AO356_11750 0.45 +0.4 2,661,646 - AO356_11750 0.45 -0.2 2,661,648 + AO356_11750 0.45 -0.6 2,661,648 + AO356_11750 0.45 +0.5 2,661,648 + AO356_11750 0.45 -0.3 2,661,648 + AO356_11750 0.45 +1.0 2,661,648 + AO356_11750 0.45 -0.9 2,661,648 + AO356_11750 0.45 -0.9 2,661,648 + AO356_11750 0.45 -1.1 2,661,648 + AO356_11750 0.45 +1.1 2,661,648 + AO356_11750 0.45 +0.2 2,661,648 + AO356_11750 0.45 +0.5 2,661,648 + AO356_11750 0.45 +0.7 2,661,648 + AO356_11750 0.45 -0.8 2,661,648 + AO356_11750 0.45 +0.5 2,661,648 + AO356_11750 0.45 -0.1 2,661,649 - AO356_11750 0.46 -0.7 2,661,649 - AO356_11750 0.46 -0.0 2,661,649 - AO356_11750 0.46 +0.4 2,661,649 - AO356_11750 0.46 +0.4 2,661,649 - AO356_11750 0.46 +0.1 2,661,649 - AO356_11750 0.46 -0.2 2,661,649 - AO356_11750 0.46 +0.3 2,661,649 - AO356_11750 0.46 -0.5 2,661,649 - AO356_11750 0.46 -0.2 2,661,649 - AO356_11750 0.46 +1.1 2,661,649 - AO356_11750 0.46 -0.4 2,661,649 - AO356_11750 0.46 +0.2 2,661,649 - AO356_11750 0.46 +0.3 2,661,649 - AO356_11750 0.46 +1.1 2,661,649 - AO356_11750 0.46 -0.6 2,661,649 - AO356_11750 0.46 -0.5 2,661,649 - AO356_11750 0.46 +0.1 2,661,688 + AO356_11750 0.49 -0.1 2,661,688 + AO356_11750 0.49 +0.1 2,661,689 - AO356_11750 0.49 -0.1 2,661,691 + AO356_11750 0.49 -0.1 2,661,691 + AO356_11750 0.49 +0.2 2,661,691 + AO356_11750 0.49 +0.4 2,661,691 + AO356_11750 0.49 -0.2 2,661,692 - AO356_11750 0.49 +1.3 2,661,758 + AO356_11750 0.54 +0.0 2,661,758 + AO356_11750 0.54 -0.7 2,661,758 + AO356_11750 0.54 +0.4 2,661,758 + AO356_11750 0.54 +0.5 2,661,758 + AO356_11750 0.54 +0.7 2,661,758 + AO356_11750 0.54 -0.7 2,661,758 + AO356_11750 0.54 +0.8 2,661,759 - AO356_11750 0.54 +0.4 2,661,759 - AO356_11750 0.54 +1.0 2,661,759 - AO356_11750 0.54 +0.2 2,661,759 - AO356_11750 0.54 +0.1 2,661,759 - AO356_11750 0.54 +0.2 2,661,759 - AO356_11750 0.54 +0.7 2,661,786 - AO356_11750 0.56 +0.4 2,661,786 - AO356_11750 0.56 +0.1 2,661,797 + AO356_11750 0.57 +0.4 2,661,797 + AO356_11750 0.57 +0.5 2,661,798 - AO356_11750 0.57 -0.5 2,661,815 - AO356_11750 0.59 +1.3 2,661,815 - AO356_11750 0.59 +1.2 2,661,917 + AO356_11750 0.67 +0.0 2,661,917 + AO356_11750 0.67 +0.1 2,661,917 + AO356_11750 0.67 +0.5 2,661,917 + AO356_11750 0.67 -0.0 2,661,917 + AO356_11750 0.67 -0.3 2,661,918 - AO356_11750 0.67 -0.3 2,661,918 - AO356_11750 0.67 +1.6 2,661,918 - AO356_11750 0.67 +0.5 2,661,918 - AO356_11750 0.67 +0.6 2,661,936 + AO356_11750 0.68 -2.8 2,661,936 + AO356_11750 0.68 -1.5 2,661,936 + AO356_11750 0.68 -1.1 2,661,936 + AO356_11750 0.68 -1.5 2,661,936 + AO356_11750 0.68 -0.4 2,661,937 - AO356_11750 0.68 +0.4 2,661,937 - AO356_11750 0.68 -0.3 2,661,937 - AO356_11750 0.68 -0.7 2,661,937 - AO356_11750 0.68 +0.5 2,661,937 - AO356_11750 0.68 -0.6 2,661,937 - AO356_11750 0.68 +0.5 2,661,937 - AO356_11750 0.68 +0.0 2,662,032 + AO356_11750 0.76 +0.3 2,662,032 + AO356_11750 0.76 +0.6 2,662,032 + AO356_11750 0.76 +0.8 2,662,032 + AO356_11750 0.76 -0.1 2,662,033 - AO356_11750 0.76 +0.4 2,662,033 - AO356_11750 0.76 -0.3 2,662,033 - AO356_11750 0.76 -0.1 2,662,050 + AO356_11750 0.77 +0.7 2,662,050 + AO356_11750 0.77 -0.1 2,662,050 + AO356_11750 0.77 -0.4 2,662,051 - AO356_11750 0.77 -0.2
Or see this region's nucleotide sequence