Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11620 and AO356_11625 are separated by 128 nucleotides AO356_11625 and AO356_11630 are separated by 303 nucleotides
AO356_11620: AO356_11620 - transcriptional regulator, at 2,630,664 to 2,631,398
_11620
AO356_11625: AO356_11625 - GABA permease, at 2,631,527 to 2,632,921
_11625
AO356_11630: AO356_11630 - DNA gyrase subunit B, at 2,633,225 to 2,635,642
_11630
Position (kb)
2631
2632
2633 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2630.636 kb on + strand at 2630.636 kb on + strand at 2630.677 kb on + strand at 2630.710 kb on + strand at 2630.710 kb on + strand at 2630.710 kb on + strand at 2630.711 kb on - strand at 2630.711 kb on - strand at 2630.711 kb on - strand at 2630.711 kb on - strand at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2631.210 kb on + strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.216 kb on + strand, within AO356_11620 at 2631.216 kb on + strand, within AO356_11620 at 2631.216 kb on + strand, within AO356_11620 at 2631.216 kb on + strand, within AO356_11620 at 2631.217 kb on - strand, within AO356_11620 at 2631.217 kb on - strand, within AO356_11620 at 2631.217 kb on - strand, within AO356_11620 at 2631.217 kb on - strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.277 kb on - strand, within AO356_11620 at 2631.325 kb on + strand at 2631.326 kb on - strand at 2631.326 kb on - strand at 2631.326 kb on - strand at 2631.326 kb on - strand at 2631.326 kb on - strand at 2631.336 kb on + strand at 2631.336 kb on + strand at 2631.336 kb on + strand at 2631.337 kb on - strand at 2631.337 kb on - strand at 2631.337 kb on - strand at 2631.337 kb on - strand at 2631.396 kb on + strand at 2631.396 kb on + strand at 2631.396 kb on + strand at 2631.397 kb on - strand at 2631.397 kb on - strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.415 kb on - strand at 2631.415 kb on - strand at 2631.415 kb on - strand at 2631.484 kb on + strand at 2631.485 kb on - strand at 2631.561 kb on - strand at 2631.561 kb on - strand at 2631.561 kb on - strand at 2631.578 kb on + strand at 2631.578 kb on + strand at 2631.579 kb on - strand at 2631.579 kb on - strand at 2631.579 kb on - strand at 2631.699 kb on + strand, within AO356_11625 at 2631.700 kb on - strand, within AO356_11625 at 2631.700 kb on - strand, within AO356_11625 at 2631.700 kb on - strand, within AO356_11625 at 2631.769 kb on + strand, within AO356_11625 at 2631.798 kb on + strand, within AO356_11625 at 2631.798 kb on + strand, within AO356_11625 at 2631.798 kb on + strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2632.005 kb on + strand, within AO356_11625 at 2632.005 kb on + strand, within AO356_11625 at 2632.005 kb on + strand, within AO356_11625 at 2632.005 kb on + strand, within AO356_11625 at 2632.006 kb on - strand, within AO356_11625 at 2632.006 kb on - strand, within AO356_11625 at 2632.104 kb on + strand, within AO356_11625 at 2632.104 kb on + strand, within AO356_11625 at 2632.105 kb on - strand, within AO356_11625 at 2632.105 kb on - strand, within AO356_11625 at 2632.105 kb on - strand, within AO356_11625 at 2632.176 kb on + strand, within AO356_11625 at 2632.176 kb on + strand, within AO356_11625 at 2632.177 kb on - strand, within AO356_11625 at 2632.177 kb on - strand, within AO356_11625 at 2632.177 kb on - strand, within AO356_11625 at 2632.479 kb on + strand, within AO356_11625 at 2632.479 kb on + strand, within AO356_11625 at 2632.629 kb on + strand, within AO356_11625 at 2632.680 kb on + strand, within AO356_11625 at 2632.680 kb on + strand, within AO356_11625 at 2632.680 kb on + strand, within AO356_11625 at 2632.680 kb on + strand, within AO356_11625 at 2632.681 kb on - strand, within AO356_11625 at 2632.681 kb on - strand, within AO356_11625 at 2632.681 kb on - strand, within AO356_11625 at 2632.681 kb on - strand, within AO356_11625 at 2632.681 kb on - strand, within AO356_11625 at 2632.681 kb on - strand, within AO356_11625 at 2632.770 kb on + strand, within AO356_11625 at 2632.770 kb on + strand, within AO356_11625 at 2632.771 kb on - strand, within AO356_11625 at 2632.928 kb on + strand at 2632.929 kb on - strand at 2632.929 kb on - strand at 2632.947 kb on + strand at 2632.947 kb on + strand at 2632.948 kb on - strand at 2632.948 kb on - strand at 2632.948 kb on - strand at 2632.948 kb on - strand at 2632.948 kb on - strand at 2632.948 kb on - strand at 2632.953 kb on + strand at 2632.954 kb on - strand at 2632.954 kb on - strand at 2632.954 kb on - strand at 2632.954 kb on - strand at 2632.954 kb on - strand at 2632.999 kb on + strand at 2632.999 kb on + strand at 2632.999 kb on + strand at 2632.999 kb on + strand at 2633.000 kb on - strand at 2633.000 kb on - strand at 2633.007 kb on + strand at 2633.008 kb on - strand at 2633.096 kb on - strand at 2633.116 kb on + strand at 2633.116 kb on + strand at 2633.116 kb on + strand at 2633.117 kb on - strand at 2633.117 kb on - strand at 2633.141 kb on + strand at 2633.141 kb on + strand at 2633.141 kb on + strand at 2633.142 kb on - strand at 2633.142 kb on - strand at 2633.142 kb on - strand at 2633.154 kb on + strand at 2633.155 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,630,636 + -0.5 2,630,636 + -0.4 2,630,677 + -0.8 2,630,710 + +1.3 2,630,710 + +0.0 2,630,710 + +0.6 2,630,711 - -0.4 2,630,711 - +0.5 2,630,711 - +0.7 2,630,711 - -0.1 2,630,976 + AO356_11620 0.42 +0.7 2,630,976 + AO356_11620 0.42 -0.3 2,630,976 + AO356_11620 0.42 -0.1 2,630,976 + AO356_11620 0.42 +0.8 2,630,976 + AO356_11620 0.42 +2.1 2,630,976 + AO356_11620 0.42 +0.3 2,630,976 + AO356_11620 0.42 +0.7 2,630,976 + AO356_11620 0.42 +0.3 2,630,976 + AO356_11620 0.42 -0.4 2,630,976 + AO356_11620 0.42 +0.8 2,630,977 - AO356_11620 0.43 +0.5 2,630,977 - AO356_11620 0.43 +0.3 2,630,977 - AO356_11620 0.43 +1.1 2,630,977 - AO356_11620 0.43 +0.3 2,630,977 - AO356_11620 0.43 -0.1 2,631,210 + AO356_11620 0.74 +0.4 2,631,211 - AO356_11620 0.74 +0.1 2,631,211 - AO356_11620 0.74 +0.3 2,631,211 - AO356_11620 0.74 -0.4 2,631,211 - AO356_11620 0.74 +0.1 2,631,211 - AO356_11620 0.74 +0.5 2,631,211 - AO356_11620 0.74 +0.4 2,631,216 + AO356_11620 0.75 +1.0 2,631,216 + AO356_11620 0.75 +0.3 2,631,216 + AO356_11620 0.75 +0.8 2,631,216 + AO356_11620 0.75 +0.4 2,631,217 - AO356_11620 0.75 +0.7 2,631,217 - AO356_11620 0.75 +0.8 2,631,217 - AO356_11620 0.75 +0.3 2,631,217 - AO356_11620 0.75 +0.1 2,631,272 + AO356_11620 0.83 -0.4 2,631,272 + AO356_11620 0.83 +0.2 2,631,272 + AO356_11620 0.83 +0.1 2,631,272 + AO356_11620 0.83 +0.5 2,631,272 + AO356_11620 0.83 +0.7 2,631,272 + AO356_11620 0.83 +1.6 2,631,272 + AO356_11620 0.83 +0.7 2,631,272 + AO356_11620 0.83 +0.7 2,631,272 + AO356_11620 0.83 -0.6 2,631,272 + AO356_11620 0.83 +0.0 2,631,272 + AO356_11620 0.83 +0.2 2,631,272 + AO356_11620 0.83 -0.2 2,631,272 + AO356_11620 0.83 +0.5 2,631,272 + AO356_11620 0.83 -0.1 2,631,272 + AO356_11620 0.83 -0.4 2,631,273 - AO356_11620 0.83 +0.2 2,631,273 - AO356_11620 0.83 -0.1 2,631,273 - AO356_11620 0.83 -1.2 2,631,273 - AO356_11620 0.83 +1.3 2,631,273 - AO356_11620 0.83 -0.1 2,631,273 - AO356_11620 0.83 -0.2 2,631,273 - AO356_11620 0.83 +0.8 2,631,273 - AO356_11620 0.83 -0.1 2,631,273 - AO356_11620 0.83 -0.1 2,631,273 - AO356_11620 0.83 +0.7 2,631,273 - AO356_11620 0.83 -0.0 2,631,273 - AO356_11620 0.83 +0.4 2,631,273 - AO356_11620 0.83 +0.2 2,631,276 + AO356_11620 0.83 -0.0 2,631,276 + AO356_11620 0.83 +1.0 2,631,276 + AO356_11620 0.83 +0.8 2,631,276 + AO356_11620 0.83 +0.2 2,631,276 + AO356_11620 0.83 +0.2 2,631,277 - AO356_11620 0.83 +0.7 2,631,325 + +0.6 2,631,326 - +1.6 2,631,326 - +0.3 2,631,326 - +0.7 2,631,326 - -1.0 2,631,326 - +0.3 2,631,336 + -0.5 2,631,336 + +1.4 2,631,336 + +0.9 2,631,337 - +0.5 2,631,337 - -0.8 2,631,337 - +0.6 2,631,337 - +0.2 2,631,396 + +0.3 2,631,396 + -0.1 2,631,396 + -0.5 2,631,397 - +0.0 2,631,397 - +0.1 2,631,414 + +0.3 2,631,414 + +0.2 2,631,414 + +0.6 2,631,414 + -0.6 2,631,414 + -0.5 2,631,414 + -0.6 2,631,415 - +0.1 2,631,415 - -0.2 2,631,415 - +0.6 2,631,484 + +0.7 2,631,485 - +0.1 2,631,561 - +0.1 2,631,561 - +0.3 2,631,561 - -0.1 2,631,578 + +0.8 2,631,578 + +1.5 2,631,579 - -0.1 2,631,579 - -0.0 2,631,579 - +0.3 2,631,699 + AO356_11625 0.12 -0.3 2,631,700 - AO356_11625 0.12 -0.7 2,631,700 - AO356_11625 0.12 +0.4 2,631,700 - AO356_11625 0.12 -1.1 2,631,769 + AO356_11625 0.17 -0.3 2,631,798 + AO356_11625 0.19 +0.8 2,631,798 + AO356_11625 0.19 -0.7 2,631,798 + AO356_11625 0.19 -0.8 2,631,799 - AO356_11625 0.19 -0.1 2,631,799 - AO356_11625 0.19 -0.1 2,631,799 - AO356_11625 0.19 -1.7 2,631,799 - AO356_11625 0.19 +0.9 2,631,799 - AO356_11625 0.19 -0.3 2,631,864 + AO356_11625 0.24 -0.2 2,631,864 + AO356_11625 0.24 -0.8 2,631,864 + AO356_11625 0.24 -0.1 2,631,864 + AO356_11625 0.24 +0.4 2,631,864 + AO356_11625 0.24 -0.4 2,631,864 + AO356_11625 0.24 -0.5 2,631,864 + AO356_11625 0.24 -0.7 2,631,864 + AO356_11625 0.24 -0.1 2,631,865 - AO356_11625 0.24 +0.9 2,631,865 - AO356_11625 0.24 +0.2 2,631,865 - AO356_11625 0.24 +0.2 2,631,865 - AO356_11625 0.24 +1.6 2,631,865 - AO356_11625 0.24 +0.4 2,631,865 - AO356_11625 0.24 -0.7 2,631,865 - AO356_11625 0.24 +0.4 2,631,865 - AO356_11625 0.24 -0.4 2,631,865 - AO356_11625 0.24 -1.0 2,632,005 + AO356_11625 0.34 +0.1 2,632,005 + AO356_11625 0.34 +0.8 2,632,005 + AO356_11625 0.34 +0.1 2,632,005 + AO356_11625 0.34 -0.4 2,632,006 - AO356_11625 0.34 +0.4 2,632,006 - AO356_11625 0.34 -1.1 2,632,104 + AO356_11625 0.41 -0.1 2,632,104 + AO356_11625 0.41 -0.3 2,632,105 - AO356_11625 0.41 -0.9 2,632,105 - AO356_11625 0.41 -2.5 2,632,105 - AO356_11625 0.41 +0.2 2,632,176 + AO356_11625 0.47 +0.0 2,632,176 + AO356_11625 0.47 +0.4 2,632,177 - AO356_11625 0.47 -0.1 2,632,177 - AO356_11625 0.47 -0.8 2,632,177 - AO356_11625 0.47 -0.3 2,632,479 + AO356_11625 0.68 +0.3 2,632,479 + AO356_11625 0.68 +0.3 2,632,629 + AO356_11625 0.79 +0.2 2,632,680 + AO356_11625 0.83 +1.1 2,632,680 + AO356_11625 0.83 -0.0 2,632,680 + AO356_11625 0.83 -1.2 2,632,680 + AO356_11625 0.83 -1.0 2,632,681 - AO356_11625 0.83 -0.5 2,632,681 - AO356_11625 0.83 +0.8 2,632,681 - AO356_11625 0.83 +0.8 2,632,681 - AO356_11625 0.83 +0.3 2,632,681 - AO356_11625 0.83 -0.3 2,632,681 - AO356_11625 0.83 -0.8 2,632,770 + AO356_11625 0.89 +0.6 2,632,770 + AO356_11625 0.89 -0.8 2,632,771 - AO356_11625 0.89 +0.0 2,632,928 + -0.4 2,632,929 - +0.0 2,632,929 - -0.2 2,632,947 + -1.1 2,632,947 + -0.4 2,632,948 - -1.7 2,632,948 - +0.1 2,632,948 - +1.3 2,632,948 - -0.3 2,632,948 - +0.1 2,632,948 - -0.4 2,632,953 + -0.2 2,632,954 - -1.2 2,632,954 - -0.5 2,632,954 - +0.2 2,632,954 - +0.5 2,632,954 - +1.8 2,632,999 + +0.2 2,632,999 + +0.7 2,632,999 + +0.3 2,632,999 + +0.0 2,633,000 - +0.5 2,633,000 - -0.6 2,633,007 + -0.5 2,633,008 - +1.6 2,633,096 - +0.3 2,633,116 + +0.4 2,633,116 + +0.1 2,633,116 + +0.8 2,633,117 - +1.2 2,633,117 - -0.5 2,633,141 + +0.1 2,633,141 + -1.0 2,633,141 + +0.1 2,633,142 - +0.1 2,633,142 - +0.2 2,633,142 - +0.2 2,633,154 + -0.4 2,633,155 - -0.6
Or see this region's nucleotide sequence