Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10595 and AO356_10600 overlap by 4 nucleotides AO356_10600 and AO356_10605 are separated by 10 nucleotides AO356_10605 and AO356_10610 are separated by 32 nucleotides AO356_10610 and AO356_10615 are separated by 356 nucleotides
AO356_10595: AO356_10595 - mangotoxin biosynthesis-involved protein MgoB, at 2,410,804 to 2,411,580
_10595
AO356_10600: AO356_10600 - aminobenzoate oxygenase, at 2,411,577 to 2,412,509
_10600
AO356_10605: AO356_10605 - peptide transporter, at 2,412,520 to 2,416,086
_10605
AO356_10610: AO356_10610 - polyketide cyclase, at 2,416,119 to 2,416,583
_10610
AO356_10615: AO356_10615 - chemotaxis protein, at 2,416,940 to 2,418,820
_10615
Position (kb)
2412
2413
2414
2415
2416
2417 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2411.593 kb on - strand at 2411.593 kb on - strand at 2411.637 kb on - strand at 2411.769 kb on + strand, within AO356_10600 at 2411.769 kb on + strand, within AO356_10600 at 2411.910 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.209 kb on - strand, within AO356_10600 at 2412.216 kb on + strand, within AO356_10600 at 2412.216 kb on + strand, within AO356_10600 at 2412.285 kb on + strand, within AO356_10600 at 2412.286 kb on - strand, within AO356_10600 at 2412.394 kb on - strand, within AO356_10600 at 2412.476 kb on - strand at 2412.495 kb on + strand at 2412.841 kb on - strand at 2413.123 kb on + strand, within AO356_10605 at 2413.124 kb on - strand, within AO356_10605 at 2413.196 kb on + strand, within AO356_10605 at 2413.196 kb on + strand, within AO356_10605 at 2413.197 kb on - strand, within AO356_10605 at 2413.197 kb on - strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.385 kb on - strand, within AO356_10605 at 2413.424 kb on - strand, within AO356_10605 at 2413.424 kb on - strand, within AO356_10605 at 2413.636 kb on + strand, within AO356_10605 at 2413.636 kb on + strand, within AO356_10605 at 2413.636 kb on + strand, within AO356_10605 at 2413.636 kb on + strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.711 kb on + strand, within AO356_10605 at 2413.721 kb on - strand, within AO356_10605 at 2414.038 kb on + strand, within AO356_10605 at 2414.038 kb on + strand, within AO356_10605 at 2414.038 kb on + strand, within AO356_10605 at 2414.038 kb on + strand, within AO356_10605 at 2414.039 kb on - strand, within AO356_10605 at 2414.039 kb on - strand, within AO356_10605 at 2414.039 kb on - strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.192 kb on - strand, within AO356_10605 at 2414.192 kb on - strand, within AO356_10605 at 2414.192 kb on - strand, within AO356_10605 at 2414.192 kb on - strand, within AO356_10605 at 2414.254 kb on + strand, within AO356_10605 at 2414.254 kb on + strand, within AO356_10605 at 2414.296 kb on + strand, within AO356_10605 at 2414.297 kb on - strand, within AO356_10605 at 2414.367 kb on - strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.430 kb on - strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.561 kb on - strand, within AO356_10605 at 2414.561 kb on - strand, within AO356_10605 at 2414.561 kb on - strand, within AO356_10605 at 2414.561 kb on - strand, within AO356_10605 at 2414.578 kb on + strand, within AO356_10605 at 2414.578 kb on + strand, within AO356_10605 at 2414.579 kb on - strand, within AO356_10605 at 2414.602 kb on + strand, within AO356_10605 at 2414.602 kb on + strand, within AO356_10605 at 2414.602 kb on + strand, within AO356_10605 at 2414.603 kb on - strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.200 kb on - strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.309 kb on - strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.485 kb on - strand, within AO356_10605 at 2415.752 kb on - strand at 2415.811 kb on + strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.928 kb on + strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2416.043 kb on + strand at 2416.044 kb on - strand at 2416.044 kb on - strand at 2416.044 kb on - strand at 2416.061 kb on - strand at 2416.061 kb on - strand at 2416.395 kb on + strand, within AO356_10610 at 2416.395 kb on + strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,411,593 - +2.4 2,411,593 - -0.1 2,411,637 - -1.1 2,411,769 + AO356_10600 0.21 -0.8 2,411,769 + AO356_10600 0.21 -0.7 2,411,910 + AO356_10600 0.36 +0.4 2,412,208 + AO356_10600 0.68 +1.0 2,412,208 + AO356_10600 0.68 +0.5 2,412,208 + AO356_10600 0.68 -0.6 2,412,208 + AO356_10600 0.68 -1.6 2,412,209 - AO356_10600 0.68 +0.0 2,412,216 + AO356_10600 0.68 -0.1 2,412,216 + AO356_10600 0.68 +1.1 2,412,285 + AO356_10600 0.76 -1.1 2,412,286 - AO356_10600 0.76 +0.5 2,412,394 - AO356_10600 0.88 +0.2 2,412,476 - -0.2 2,412,495 + -0.8 2,412,841 - +0.2 2,413,123 + AO356_10605 0.17 +0.2 2,413,124 - AO356_10605 0.17 -0.1 2,413,196 + AO356_10605 0.19 +0.4 2,413,196 + AO356_10605 0.19 -0.0 2,413,197 - AO356_10605 0.19 -0.5 2,413,197 - AO356_10605 0.19 -0.1 2,413,382 + AO356_10605 0.24 +0.3 2,413,382 + AO356_10605 0.24 -0.4 2,413,382 + AO356_10605 0.24 -0.3 2,413,382 + AO356_10605 0.24 +1.1 2,413,382 + AO356_10605 0.24 +0.5 2,413,382 + AO356_10605 0.24 +0.6 2,413,382 + AO356_10605 0.24 -0.2 2,413,382 + AO356_10605 0.24 -0.5 2,413,383 - AO356_10605 0.24 +0.4 2,413,383 - AO356_10605 0.24 +0.9 2,413,383 - AO356_10605 0.24 +0.0 2,413,383 - AO356_10605 0.24 +1.1 2,413,383 - AO356_10605 0.24 +0.1 2,413,383 - AO356_10605 0.24 -0.4 2,413,383 - AO356_10605 0.24 +0.1 2,413,383 - AO356_10605 0.24 +1.7 2,413,383 - AO356_10605 0.24 -0.3 2,413,383 - AO356_10605 0.24 -0.2 2,413,385 - AO356_10605 0.24 -0.1 2,413,424 - AO356_10605 0.25 +0.7 2,413,424 - AO356_10605 0.25 +0.6 2,413,636 + AO356_10605 0.31 -1.5 2,413,636 + AO356_10605 0.31 -1.4 2,413,636 + AO356_10605 0.31 +0.8 2,413,636 + AO356_10605 0.31 +0.2 2,413,637 - AO356_10605 0.31 +0.2 2,413,637 - AO356_10605 0.31 -0.6 2,413,637 - AO356_10605 0.31 -0.6 2,413,637 - AO356_10605 0.31 +0.3 2,413,637 - AO356_10605 0.31 +0.1 2,413,637 - AO356_10605 0.31 -0.4 2,413,637 - AO356_10605 0.31 +0.6 2,413,711 + AO356_10605 0.33 -0.0 2,413,721 - AO356_10605 0.34 +0.8 2,414,038 + AO356_10605 0.43 -0.2 2,414,038 + AO356_10605 0.43 +0.5 2,414,038 + AO356_10605 0.43 -0.3 2,414,038 + AO356_10605 0.43 +0.0 2,414,039 - AO356_10605 0.43 +1.0 2,414,039 - AO356_10605 0.43 -0.1 2,414,039 - AO356_10605 0.43 +0.6 2,414,191 + AO356_10605 0.47 +1.0 2,414,191 + AO356_10605 0.47 -0.2 2,414,191 + AO356_10605 0.47 -0.1 2,414,191 + AO356_10605 0.47 -0.3 2,414,191 + AO356_10605 0.47 +0.2 2,414,192 - AO356_10605 0.47 -0.0 2,414,192 - AO356_10605 0.47 -0.6 2,414,192 - AO356_10605 0.47 +0.2 2,414,192 - AO356_10605 0.47 +0.1 2,414,254 + AO356_10605 0.49 +1.0 2,414,254 + AO356_10605 0.49 -0.8 2,414,296 + AO356_10605 0.50 -0.6 2,414,297 - AO356_10605 0.50 +0.0 2,414,367 - AO356_10605 0.52 -1.8 2,414,429 + AO356_10605 0.54 -0.7 2,414,429 + AO356_10605 0.54 -0.6 2,414,429 + AO356_10605 0.54 +0.4 2,414,429 + AO356_10605 0.54 -0.4 2,414,429 + AO356_10605 0.54 +0.0 2,414,430 - AO356_10605 0.54 +0.3 2,414,560 + AO356_10605 0.57 +0.7 2,414,560 + AO356_10605 0.57 +0.5 2,414,560 + AO356_10605 0.57 +0.1 2,414,560 + AO356_10605 0.57 -0.4 2,414,560 + AO356_10605 0.57 +0.0 2,414,561 - AO356_10605 0.57 +0.6 2,414,561 - AO356_10605 0.57 +0.6 2,414,561 - AO356_10605 0.57 +0.2 2,414,561 - AO356_10605 0.57 +0.7 2,414,578 + AO356_10605 0.58 -0.5 2,414,578 + AO356_10605 0.58 +0.4 2,414,579 - AO356_10605 0.58 +0.3 2,414,602 + AO356_10605 0.58 +0.3 2,414,602 + AO356_10605 0.58 +0.1 2,414,602 + AO356_10605 0.58 -0.1 2,414,603 - AO356_10605 0.58 -0.7 2,415,199 + AO356_10605 0.75 +0.3 2,415,199 + AO356_10605 0.75 +0.4 2,415,199 + AO356_10605 0.75 -0.4 2,415,199 + AO356_10605 0.75 -0.1 2,415,200 - AO356_10605 0.75 +0.4 2,415,308 + AO356_10605 0.78 +0.3 2,415,308 + AO356_10605 0.78 +0.5 2,415,308 + AO356_10605 0.78 -0.0 2,415,308 + AO356_10605 0.78 -0.0 2,415,308 + AO356_10605 0.78 +0.5 2,415,308 + AO356_10605 0.78 +0.4 2,415,308 + AO356_10605 0.78 +0.3 2,415,308 + AO356_10605 0.78 +0.8 2,415,309 - AO356_10605 0.78 -0.0 2,415,484 + AO356_10605 0.83 -0.0 2,415,484 + AO356_10605 0.83 +0.3 2,415,484 + AO356_10605 0.83 +0.1 2,415,484 + AO356_10605 0.83 -0.7 2,415,484 + AO356_10605 0.83 +0.4 2,415,485 - AO356_10605 0.83 +0.4 2,415,752 - -0.1 2,415,811 + -0.4 2,415,812 - -0.5 2,415,812 - -0.1 2,415,812 - +0.9 2,415,812 - -0.5 2,415,812 - +0.2 2,415,928 + +0.1 2,415,929 - -0.2 2,415,929 - +0.1 2,415,929 - -0.3 2,415,929 - +0.6 2,416,043 + +0.3 2,416,044 - +1.6 2,416,044 - -0.0 2,416,044 - -0.3 2,416,061 - +0.3 2,416,061 - +0.8 2,416,395 + AO356_10610 0.59 +0.1 2,416,395 + AO356_10610 0.59 +0.8 2,416,396 - AO356_10610 0.60 +0.7 2,416,396 - AO356_10610 0.60 -0.4 2,416,396 - AO356_10610 0.60 +0.3 2,416,581 + +0.6 2,416,581 + +1.0 2,416,581 + +0.7 2,416,581 + +0.2 2,416,581 + +0.2 2,416,581 + -0.2 2,416,582 - -0.7 2,416,582 - +0.8 2,416,582 - -0.1 2,416,582 - +0.6 2,416,582 - +0.8 2,416,582 - -0.3 2,416,582 - +0.4
Or see this region's nucleotide sequence