Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05780 and AO356_05785 are separated by 9 nucleotides AO356_05785 and AO356_05790 overlap by 8 nucleotides AO356_05790 and AO356_05795 overlap by 1 nucleotides
AO356_05780: AO356_05780 - phage tail protein, at 1,284,794 to 1,285,810
_05780
AO356_05785: AO356_05785 - phage tail protein, at 1,285,820 to 1,286,032
_05785
AO356_05790: AO356_05790 - hypothetical protein, at 1,286,025 to 1,286,408
_05790
AO356_05795: AO356_05795 - phage tail protein, at 1,286,408 to 1,288,588
_05795
Position (kb)
1285
1286
1287 Strain fitness (log2 ratio)
-1
0
1 at 1284.838 kb on - strand at 1285.002 kb on - strand, within AO356_05780 at 1285.140 kb on + strand, within AO356_05780 at 1285.140 kb on + strand, within AO356_05780 at 1285.140 kb on + strand, within AO356_05780 at 1285.140 kb on + strand, within AO356_05780 at 1285.141 kb on - strand, within AO356_05780 at 1285.281 kb on + strand, within AO356_05780 at 1285.281 kb on + strand, within AO356_05780 at 1285.281 kb on + strand, within AO356_05780 at 1285.282 kb on - strand, within AO356_05780 at 1285.282 kb on - strand, within AO356_05780 at 1285.282 kb on - strand, within AO356_05780 at 1285.282 kb on - strand, within AO356_05780 at 1285.282 kb on - strand, within AO356_05780 at 1285.282 kb on - strand, within AO356_05780 at 1285.282 kb on - strand, within AO356_05780 at 1285.282 kb on - strand, within AO356_05780 at 1285.776 kb on + strand at 1285.957 kb on + strand, within AO356_05785 at 1285.957 kb on + strand, within AO356_05785 at 1285.983 kb on + strand, within AO356_05785 at 1286.027 kb on - strand at 1286.228 kb on - strand, within AO356_05790 at 1286.228 kb on - strand, within AO356_05790 at 1286.337 kb on + strand, within AO356_05790 at 1286.350 kb on + strand, within AO356_05790 at 1286.413 kb on + strand at 1286.413 kb on + strand at 1286.414 kb on - strand at 1286.414 kb on - strand at 1286.414 kb on - strand at 1286.550 kb on + strand at 1286.550 kb on + strand at 1286.550 kb on + strand at 1286.550 kb on + strand at 1286.550 kb on + strand at 1286.551 kb on - strand at 1286.925 kb on - strand, within AO356_05795
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,284,838 - -0.1 1,285,002 - AO356_05780 0.20 -0.2 1,285,140 + AO356_05780 0.34 +0.4 1,285,140 + AO356_05780 0.34 +0.6 1,285,140 + AO356_05780 0.34 +0.6 1,285,140 + AO356_05780 0.34 +0.0 1,285,141 - AO356_05780 0.34 +0.1 1,285,281 + AO356_05780 0.48 +0.3 1,285,281 + AO356_05780 0.48 -0.1 1,285,281 + AO356_05780 0.48 -0.8 1,285,282 - AO356_05780 0.48 -0.0 1,285,282 - AO356_05780 0.48 +0.3 1,285,282 - AO356_05780 0.48 +0.5 1,285,282 - AO356_05780 0.48 +0.6 1,285,282 - AO356_05780 0.48 -0.4 1,285,282 - AO356_05780 0.48 +0.2 1,285,282 - AO356_05780 0.48 -0.5 1,285,282 - AO356_05780 0.48 +0.8 1,285,776 + -0.5 1,285,957 + AO356_05785 0.64 +0.2 1,285,957 + AO356_05785 0.64 +0.7 1,285,983 + AO356_05785 0.77 -1.1 1,286,027 - -0.1 1,286,228 - AO356_05790 0.53 -0.8 1,286,228 - AO356_05790 0.53 -0.1 1,286,337 + AO356_05790 0.81 -0.2 1,286,350 + AO356_05790 0.85 +0.2 1,286,413 + -0.2 1,286,413 + -0.6 1,286,414 - -0.4 1,286,414 - -0.1 1,286,414 - +0.7 1,286,550 + -0.6 1,286,550 + +0.8 1,286,550 + +0.5 1,286,550 + +0.1 1,286,550 + +0.4 1,286,551 - +0.3 1,286,925 - AO356_05795 0.24 +0.6
Or see this region's nucleotide sequence