Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03205 and AO356_03210 are separated by 635 nucleotides AO356_03210 and AO356_03215 are separated by 123 nucleotides
AO356_03205: AO356_03205 - acetyltransferase, at 713,000 to 713,281
_03205
AO356_03210: AO356_03210 - hypothetical protein, at 713,917 to 714,168
_03210
AO356_03215: AO356_03215 - hypothetical protein, at 714,292 to 715,263
_03215
Position (kb) 713
714
715 Strain fitness (log2 ratio) -1
0
1
2 at 712.948 kb on - strand at 712.948 kb on - strand at 713.037 kb on + strand, within AO356_03205 at 713.037 kb on + strand, within AO356_03205 at 713.037 kb on + strand, within AO356_03205 at 713.037 kb on + strand, within AO356_03205 at 713.037 kb on + strand, within AO356_03205 at 713.037 kb on + strand, within AO356_03205 at 713.037 kb on + strand, within AO356_03205 at 713.038 kb on - strand, within AO356_03205 at 713.038 kb on - strand, within AO356_03205 at 713.038 kb on - strand, within AO356_03205 at 713.038 kb on - strand, within AO356_03205 at 713.038 kb on - strand, within AO356_03205 at 713.038 kb on - strand, within AO356_03205 at 713.049 kb on + strand, within AO356_03205 at 713.049 kb on + strand, within AO356_03205 at 713.050 kb on - strand, within AO356_03205 at 713.050 kb on - strand, within AO356_03205 at 713.050 kb on - strand, within AO356_03205 at 713.073 kb on + strand, within AO356_03205 at 713.091 kb on + strand, within AO356_03205 at 713.091 kb on + strand, within AO356_03205 at 713.163 kb on + strand, within AO356_03205 at 713.163 kb on + strand, within AO356_03205 at 713.163 kb on + strand, within AO356_03205 at 713.164 kb on - strand, within AO356_03205 at 713.164 kb on - strand, within AO356_03205 at 713.164 kb on - strand, within AO356_03205 at 713.168 kb on - strand, within AO356_03205 at 713.168 kb on - strand, within AO356_03205 at 713.168 kb on - strand, within AO356_03205 at 713.195 kb on - strand, within AO356_03205 at 713.196 kb on + strand, within AO356_03205 at 713.196 kb on + strand, within AO356_03205 at 713.196 kb on + strand, within AO356_03205 at 713.196 kb on + strand, within AO356_03205 at 713.196 kb on + strand, within AO356_03205 at 713.196 kb on + strand, within AO356_03205 at 713.196 kb on + strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.197 kb on - strand, within AO356_03205 at 713.205 kb on + strand, within AO356_03205 at 713.205 kb on + strand, within AO356_03205 at 713.205 kb on + strand, within AO356_03205 at 713.285 kb on + strand at 713.286 kb on - strand at 713.286 kb on - strand at 713.286 kb on - strand at 713.314 kb on + strand at 713.314 kb on + strand at 713.314 kb on + strand at 713.348 kb on + strand at 713.348 kb on + strand at 713.349 kb on - strand at 713.349 kb on - strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.421 kb on + strand at 713.421 kb on + strand at 713.422 kb on - strand at 713.422 kb on - strand at 713.422 kb on - strand at 713.530 kb on + strand at 713.530 kb on + strand at 713.531 kb on - strand at 713.531 kb on - strand at 713.573 kb on + strand at 713.577 kb on + strand at 713.578 kb on - strand at 713.592 kb on + strand at 713.593 kb on - strand at 713.598 kb on + strand at 713.598 kb on + strand at 713.651 kb on + strand at 713.742 kb on - strand at 713.743 kb on + strand at 713.743 kb on + strand at 713.743 kb on + strand at 713.744 kb on - strand at 713.744 kb on - strand at 713.744 kb on - strand at 713.826 kb on - strand at 713.829 kb on + strand at 713.830 kb on - strand at 713.832 kb on + strand at 713.832 kb on + strand at 713.833 kb on - strand at 713.838 kb on + strand at 713.848 kb on + strand at 713.848 kb on + strand at 713.848 kb on + strand at 713.849 kb on - strand at 713.849 kb on - strand at 713.849 kb on - strand at 713.849 kb on - strand at 713.849 kb on - strand at 713.849 kb on - strand at 713.889 kb on + strand at 713.889 kb on + strand at 713.889 kb on + strand at 713.890 kb on - strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.892 kb on + strand at 713.893 kb on - strand at 713.893 kb on - strand at 713.893 kb on - strand at 713.893 kb on - strand at 714.061 kb on + strand, within AO356_03210 at 714.066 kb on + strand, within AO356_03210 at 714.166 kb on + strand at 714.166 kb on + strand at 714.166 kb on + strand at 714.166 kb on + strand at 714.166 kb on + strand at 714.167 kb on - strand at 714.167 kb on - strand at 714.167 kb on - strand at 714.169 kb on + strand at 714.170 kb on - strand at 714.170 kb on - strand at 714.293 kb on + strand at 714.294 kb on - strand at 714.340 kb on - strand at 714.340 kb on - strand at 714.510 kb on + strand, within AO356_03215 at 714.511 kb on - strand, within AO356_03215 at 714.525 kb on - strand, within AO356_03215 at 714.554 kb on + strand, within AO356_03215 at 714.555 kb on - strand, within AO356_03215 at 714.613 kb on + strand, within AO356_03215 at 714.613 kb on + strand, within AO356_03215 at 714.613 kb on + strand, within AO356_03215 at 714.613 kb on + strand, within AO356_03215 at 714.613 kb on + strand, within AO356_03215 at 714.614 kb on - strand, within AO356_03215 at 714.614 kb on - strand, within AO356_03215 at 714.905 kb on + strand, within AO356_03215 at 714.905 kb on + strand, within AO356_03215 at 714.905 kb on + strand, within AO356_03215 at 714.905 kb on + strand, within AO356_03215 at 714.905 kb on + strand, within AO356_03215 at 714.906 kb on - strand, within AO356_03215 at 714.906 kb on - strand, within AO356_03215 at 714.906 kb on - strand, within AO356_03215 at 714.906 kb on - strand, within AO356_03215 at 714.906 kb on - strand, within AO356_03215 at 714.906 kb on - strand, within AO356_03215 at 714.932 kb on + strand, within AO356_03215 at 714.932 kb on + strand, within AO356_03215 at 714.932 kb on + strand, within AO356_03215 at 714.932 kb on + strand, within AO356_03215 at 714.932 kb on + strand, within AO356_03215 at 714.933 kb on - strand, within AO356_03215 at 714.933 kb on - strand, within AO356_03215 at 714.933 kb on - strand, within AO356_03215 at 714.935 kb on + strand, within AO356_03215 at 714.935 kb on + strand, within AO356_03215 at 714.936 kb on - strand, within AO356_03215 at 715.077 kb on - strand, within AO356_03215 at 715.077 kb on - strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.088 kb on + strand, within AO356_03215 at 715.089 kb on - strand, within AO356_03215 at 715.089 kb on - strand, within AO356_03215 at 715.089 kb on - strand, within AO356_03215 at 715.089 kb on - strand, within AO356_03215 at 715.089 kb on - strand, within AO356_03215 at 715.089 kb on - strand, within AO356_03215 at 715.121 kb on + strand, within AO356_03215 at 715.121 kb on + strand, within AO356_03215 at 715.122 kb on - strand, within AO356_03215
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 712,948 - +1.4 712,948 - -0.4 713,037 + AO356_03205 0.13 +0.2 713,037 + AO356_03205 0.13 -0.1 713,037 + AO356_03205 0.13 +0.2 713,037 + AO356_03205 0.13 +0.5 713,037 + AO356_03205 0.13 -0.5 713,037 + AO356_03205 0.13 +0.7 713,037 + AO356_03205 0.13 +0.5 713,038 - AO356_03205 0.13 +0.7 713,038 - AO356_03205 0.13 +0.8 713,038 - AO356_03205 0.13 -0.1 713,038 - AO356_03205 0.13 +1.2 713,038 - AO356_03205 0.13 -0.1 713,038 - AO356_03205 0.13 -0.9 713,049 + AO356_03205 0.17 -0.9 713,049 + AO356_03205 0.17 -0.2 713,050 - AO356_03205 0.18 +1.2 713,050 - AO356_03205 0.18 +0.7 713,050 - AO356_03205 0.18 +1.2 713,073 + AO356_03205 0.26 +0.4 713,091 + AO356_03205 0.32 -1.4 713,091 + AO356_03205 0.32 -0.7 713,163 + AO356_03205 0.58 +0.3 713,163 + AO356_03205 0.58 +0.2 713,163 + AO356_03205 0.58 -0.3 713,164 - AO356_03205 0.58 +0.3 713,164 - AO356_03205 0.58 -0.2 713,164 - AO356_03205 0.58 +1.2 713,168 - AO356_03205 0.60 +0.8 713,168 - AO356_03205 0.60 +0.7 713,168 - AO356_03205 0.60 +0.2 713,195 - AO356_03205 0.69 -0.2 713,196 + AO356_03205 0.70 +0.1 713,196 + AO356_03205 0.70 +0.7 713,196 + AO356_03205 0.70 +1.1 713,196 + AO356_03205 0.70 -0.2 713,196 + AO356_03205 0.70 +1.4 713,196 + AO356_03205 0.70 -0.5 713,196 + AO356_03205 0.70 -0.0 713,197 - AO356_03205 0.70 -0.1 713,197 - AO356_03205 0.70 +1.5 713,197 - AO356_03205 0.70 -0.2 713,197 - AO356_03205 0.70 +0.8 713,197 - AO356_03205 0.70 +0.9 713,197 - AO356_03205 0.70 +0.7 713,197 - AO356_03205 0.70 +0.6 713,197 - AO356_03205 0.70 +0.6 713,197 - AO356_03205 0.70 -0.4 713,197 - AO356_03205 0.70 -0.1 713,197 - AO356_03205 0.70 +0.1 713,197 - AO356_03205 0.70 +0.7 713,205 + AO356_03205 0.73 -0.1 713,205 + AO356_03205 0.73 +0.0 713,205 + AO356_03205 0.73 +0.7 713,285 + +0.1 713,286 - -0.6 713,286 - -0.2 713,286 - -0.2 713,314 + +0.3 713,314 + +0.1 713,314 + +0.3 713,348 + +1.0 713,348 + +0.2 713,349 - +0.1 713,349 - -0.0 713,418 + +0.7 713,418 + +0.8 713,419 - +0.0 713,419 - +0.1 713,419 - +0.2 713,419 - -0.1 713,419 - +1.2 713,421 + +0.8 713,421 + +0.4 713,422 - +0.0 713,422 - -0.5 713,422 - -0.2 713,530 + -0.5 713,530 + +0.6 713,531 - +0.7 713,531 - +0.3 713,573 + +1.0 713,577 + +0.2 713,578 - +0.4 713,592 + +0.6 713,593 - +0.6 713,598 + -0.7 713,598 + +0.5 713,651 + +1.3 713,742 - +0.5 713,743 + -0.9 713,743 + +0.3 713,743 + +0.2 713,744 - -0.9 713,744 - +1.0 713,744 - -0.8 713,826 - -0.1 713,829 + +1.1 713,830 - +0.5 713,832 + +1.3 713,832 + +0.2 713,833 - +1.3 713,838 + +0.2 713,848 + -0.1 713,848 + -0.8 713,848 + -0.4 713,849 - -0.6 713,849 - -0.0 713,849 - -0.6 713,849 - +1.2 713,849 - +0.2 713,849 - -0.3 713,889 + -0.0 713,889 + +0.1 713,889 + +0.7 713,890 - +0.9 713,892 + -0.3 713,892 + +0.4 713,892 + +1.9 713,892 + -1.5 713,892 + +0.2 713,892 + +0.4 713,892 + +1.3 713,892 + -1.1 713,892 + +0.3 713,892 + +0.8 713,893 - +1.6 713,893 - +1.4 713,893 - -0.6 713,893 - +0.5 714,061 + AO356_03210 0.57 +0.4 714,066 + AO356_03210 0.59 +0.9 714,166 + +1.5 714,166 + +0.3 714,166 + +0.3 714,166 + +0.9 714,166 + +1.3 714,167 - -0.2 714,167 - +0.7 714,167 - -0.4 714,169 + -1.1 714,170 - +0.7 714,170 - +1.1 714,293 + +0.3 714,294 - +0.6 714,340 - +0.3 714,340 - +0.3 714,510 + AO356_03215 0.22 +0.6 714,511 - AO356_03215 0.23 +0.6 714,525 - AO356_03215 0.24 +0.1 714,554 + AO356_03215 0.27 +1.1 714,555 - AO356_03215 0.27 +1.5 714,613 + AO356_03215 0.33 -0.9 714,613 + AO356_03215 0.33 -0.5 714,613 + AO356_03215 0.33 +1.4 714,613 + AO356_03215 0.33 -0.9 714,613 + AO356_03215 0.33 +1.2 714,614 - AO356_03215 0.33 +0.5 714,614 - AO356_03215 0.33 +0.5 714,905 + AO356_03215 0.63 +0.6 714,905 + AO356_03215 0.63 +0.3 714,905 + AO356_03215 0.63 +0.5 714,905 + AO356_03215 0.63 -1.0 714,905 + AO356_03215 0.63 -0.1 714,906 - AO356_03215 0.63 +0.3 714,906 - AO356_03215 0.63 +0.2 714,906 - AO356_03215 0.63 +0.7 714,906 - AO356_03215 0.63 -0.7 714,906 - AO356_03215 0.63 +0.8 714,906 - AO356_03215 0.63 +0.2 714,932 + AO356_03215 0.66 +0.2 714,932 + AO356_03215 0.66 +0.2 714,932 + AO356_03215 0.66 +0.2 714,932 + AO356_03215 0.66 +0.9 714,932 + AO356_03215 0.66 +0.1 714,933 - AO356_03215 0.66 -0.3 714,933 - AO356_03215 0.66 +0.5 714,933 - AO356_03215 0.66 -1.1 714,935 + AO356_03215 0.66 -0.1 714,935 + AO356_03215 0.66 -0.9 714,936 - AO356_03215 0.66 +0.2 715,077 - AO356_03215 0.81 -0.0 715,077 - AO356_03215 0.81 -1.4 715,088 + AO356_03215 0.82 -0.8 715,088 + AO356_03215 0.82 +0.9 715,088 + AO356_03215 0.82 +0.3 715,088 + AO356_03215 0.82 +0.1 715,088 + AO356_03215 0.82 -1.1 715,088 + AO356_03215 0.82 +0.3 715,088 + AO356_03215 0.82 +0.5 715,088 + AO356_03215 0.82 -0.4 715,088 + AO356_03215 0.82 +0.3 715,088 + AO356_03215 0.82 +0.2 715,089 - AO356_03215 0.82 -0.4 715,089 - AO356_03215 0.82 -0.4 715,089 - AO356_03215 0.82 +0.4 715,089 - AO356_03215 0.82 +1.7 715,089 - AO356_03215 0.82 -0.3 715,089 - AO356_03215 0.82 +1.1 715,121 + AO356_03215 0.85 -0.1 715,121 + AO356_03215 0.85 +0.2 715,122 - AO356_03215 0.85 +0.7
Or see this region's nucleotide sequence