Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2726
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,449,012 | + | -0.9 | |||
3,449,192 | + | -1.1 | |||
3,449,300 | - | -0.3 | |||
3,449,406 | + | -1.2 | |||
3,449,708 | - | -0.4 | |||
3,449,748 | + | -0.3 | |||
3,449,766 | + | -0.2 | |||
3,449,811 | - | -0.6 | |||
3,449,813 | + | -1.3 | |||
3,449,815 | + | -2.0 | |||
3,449,815 | + | -0.5 | |||
3,449,823 | - | +0.8 | |||
3,449,839 | + | +0.5 | |||
3,449,839 | + | -0.5 | |||
3,449,839 | + | -0.9 | |||
3,449,839 | + | -0.7 | |||
3,449,839 | + | -1.1 | |||
3,449,839 | + | -3.9 | |||
3,449,847 | - | -0.6 | |||
3,449,894 | + | -1.0 | |||
3,450,871 | - | -1.1 | |||
3,451,321 | - | DvMF_2727 | 0.28 | -1.3 | |
3,451,396 | - | DvMF_2727 | 0.32 | -0.4 | |
3,451,396 | - | DvMF_2727 | 0.32 | -0.8 | |
3,451,586 | + | DvMF_2727 | 0.43 | +1.7 |
Or see this region's nucleotide sequence