Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2659
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,358,587 | - | +0.0 | |||
3,358,670 | - | -0.8 | |||
3,358,694 | + | -1.2 | |||
3,358,702 | - | -0.2 | |||
3,358,702 | - | -0.7 | |||
3,358,702 | - | -0.4 | |||
3,358,789 | + | DvMF_2659 | 0.10 | +0.1 | |
3,358,895 | - | DvMF_2659 | 0.19 | -3.5 | |
3,358,895 | - | DvMF_2659 | 0.19 | -1.0 | |
3,359,095 | + | DvMF_2659 | 0.36 | -1.4 | |
3,359,219 | - | DvMF_2659 | 0.46 | -1.5 | |
3,359,252 | + | DvMF_2659 | 0.48 | +0.4 | |
3,359,327 | - | DvMF_2659 | 0.55 | -3.1 | |
3,359,516 | + | DvMF_2659 | 0.70 | +0.4 | |
3,359,663 | + | DvMF_2659 | 0.82 | +0.0 | |
3,359,687 | - | DvMF_2659 | 0.84 | -1.1 | |
3,359,872 | + | -2.0 | |||
3,359,941 | - | +0.9 | |||
3,359,948 | - | -0.6 | |||
3,360,162 | + | DvMF_2660 | 0.34 | -0.7 | |
3,360,165 | - | DvMF_2660 | 0.34 | +0.1 | |
3,360,475 | - | DvMF_2660 | 0.71 | -1.3 | |
3,360,493 | + | DvMF_2660 | 0.73 | -0.6 | |
3,360,515 | - | DvMF_2660 | 0.76 | -0.5 | |
3,360,651 | - | -2.7 |
Or see this region's nucleotide sequence