Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2398
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,030,459 | + | DvMF_2397 | 0.86 | -4.6 | |
3,030,589 | - | -1.5 | |||
3,030,644 | - | -0.5 | |||
3,030,656 | - | -0.9 | |||
3,030,738 | - | -0.8 | |||
3,030,890 | + | -2.6 | |||
3,031,122 | - | DvMF_2398 | 0.12 | -1.0 | |
3,031,324 | + | DvMF_2398 | 0.34 | -1.8 | |
3,031,337 | - | DvMF_2398 | 0.35 | -0.3 | |
3,031,750 | - | DvMF_2398 | 0.79 | -1.8 | |
3,031,775 | - | DvMF_2398 | 0.82 | -0.2 | |
3,031,918 | + | -0.1 | |||
3,032,117 | + | DvMF_2399 | 0.16 | -1.6 | |
3,032,182 | - | DvMF_2399 | 0.22 | -0.9 | |
3,032,231 | - | DvMF_2399 | 0.27 | -0.3 | |
3,032,621 | + | DvMF_2399 | 0.65 | -2.7 | |
3,032,625 | - | DvMF_2399 | 0.66 | -0.4 |
Or see this region's nucleotide sequence