Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2154
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,683,674 | - | DvMF_2153 | 0.75 | -0.1 | |
| 2,683,701 | + | DvMF_2153 | 0.76 | -1.4 | |
| 2,683,718 | + | DvMF_2153 | 0.77 | -0.8 | |
| 2,683,875 | + | DvMF_2153 | 0.86 | -1.4 | |
| 2,684,719 | - | DvMF_2154 | 0.20 | -0.6 | |
| 2,684,986 | + | DvMF_2154 | 0.44 | -0.7 | |
| 2,685,108 | - | DvMF_2154 | 0.55 | -3.3 | |
| 2,685,372 | + | DvMF_2154 | 0.79 | -1.2 | |
| 2,685,372 | + | DvMF_2154 | 0.79 | -0.9 | |
| 2,685,415 | + | DvMF_2154 | 0.83 | -0.7 | |
| 2,685,434 | - | DvMF_2154 | 0.84 | -1.1 | |
| 2,685,710 | - | -0.9 | |||
| 2,685,994 | + | DvMF_2155 | 0.12 | -2.5 | |
| 2,686,151 | - | DvMF_2155 | 0.24 | -0.2 | |
| 2,686,159 | + | DvMF_2155 | 0.25 | -1.4 | |
| 2,686,179 | - | DvMF_2155 | 0.26 | -2.0 | |
| 2,686,446 | - | DvMF_2155 | 0.47 | -0.5 | |
| 2,686,468 | + | DvMF_2155 | 0.48 | -1.2 | |
| 2,686,589 | + | DvMF_2155 | 0.58 | -0.3 |
Or see this region's nucleotide sequence