Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1885
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,320,975 | + | -0.5 | |||
| 2,321,294 | - | DvMF_1884 | 0.29 | +0.3 | |
| 2,321,358 | + | DvMF_1884 | 0.48 | -0.2 | |
| 2,321,358 | + | DvMF_1884 | 0.48 | -1.2 | |
| 2,321,726 | - | +0.0 | |||
| 2,322,093 | + | DvMF_1885 | 0.49 | +0.3 | |
| 2,322,184 | - | DvMF_1885 | 0.65 | -0.5 | |
| 2,322,227 | - | DvMF_1885 | 0.72 | -0.8 | |
| 2,322,534 | + | +0.4 | |||
| 2,322,552 | - | +1.4 | |||
| 2,322,685 | + | -0.4 | |||
| 2,322,709 | + | -0.8 | |||
| 2,322,713 | - | -0.4 | |||
| 2,322,931 | - | +0.6 | |||
| 2,323,152 | - | DvMF_1886 | 0.25 | -0.9 | |
| 2,323,184 | + | DvMF_1886 | 0.35 | -0.8 | |
| 2,323,292 | - | DvMF_1886 | 0.68 | +0.8 |
Or see this region's nucleotide sequence