Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1873
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,299,816 | - | DvMF_1872 | 0.63 | -1.7 | |
2,299,820 | - | DvMF_1872 | 0.64 | -1.6 | |
2,299,983 | + | DvMF_1872 | 0.76 | -0.2 | |
2,300,102 | - | DvMF_1872 | 0.85 | -0.9 | |
2,300,159 | - | DvMF_1872 | 0.90 | +0.3 | |
2,300,274 | - | -0.2 | |||
2,300,451 | + | -0.8 | |||
2,300,722 | + | -3.1 | |||
2,300,792 | + | -0.8 | |||
2,300,921 | - | DvMF_1873 | 0.16 | -0.4 | |
2,301,076 | + | DvMF_1873 | 0.28 | +0.0 | |
2,301,076 | + | DvMF_1873 | 0.28 | -0.2 | |
2,301,076 | + | DvMF_1873 | 0.28 | -4.2 | |
2,301,076 | + | DvMF_1873 | 0.28 | +0.4 | |
2,301,084 | - | DvMF_1873 | 0.28 | -2.1 | |
2,301,113 | + | DvMF_1873 | 0.31 | -3.2 | |
2,301,197 | - | DvMF_1873 | 0.37 | -0.4 | |
2,301,264 | + | DvMF_1873 | 0.42 | -2.2 | |
2,301,320 | + | DvMF_1873 | 0.46 | -0.4 | |
2,301,546 | - | DvMF_1873 | 0.63 | +0.1 | |
2,301,654 | + | DvMF_1873 | 0.71 | -0.6 | |
2,301,839 | + | DvMF_1873 | 0.84 | -0.4 | |
2,301,841 | + | DvMF_1873 | 0.84 | -1.1 | |
2,301,899 | + | DvMF_1873 | 0.89 | -0.8 | |
2,302,036 | - | +0.5 |
Or see this region's nucleotide sequence