Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1821
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,222,553 | + | DvMF_1820 | 0.43 | -0.1 | |
2,222,602 | + | DvMF_1820 | 0.46 | -0.1 | |
2,222,718 | + | DvMF_1820 | 0.53 | -0.4 | |
2,222,795 | + | DvMF_1820 | 0.58 | -1.2 | |
2,222,808 | - | DvMF_1820 | 0.59 | -1.0 | |
2,222,914 | + | DvMF_1820 | 0.66 | +0.1 | |
2,222,921 | + | DvMF_1820 | 0.67 | -0.9 | |
2,222,949 | - | DvMF_1820 | 0.68 | -0.4 | |
2,223,220 | + | DvMF_1820 | 0.86 | -0.5 | |
2,223,277 | + | DvMF_1820 | 0.90 | -0.1 | |
2,223,472 | + | -0.9 | |||
2,223,480 | - | -1.2 | |||
2,223,480 | - | -0.7 | |||
2,223,655 | + | DvMF_1821 | 0.28 | -1.2 | |
2,223,900 | + | DvMF_1821 | 0.78 | -0.4 | |
2,224,072 | + | -0.7 | |||
2,224,415 | - | DvMF_1822 | 0.17 | -0.6 | |
2,224,704 | + | DvMF_1822 | 0.41 | +0.3 | |
2,224,760 | - | DvMF_1822 | 0.46 | -0.5 | |
2,224,803 | - | DvMF_1822 | 0.49 | +0.5 | |
2,224,803 | - | DvMF_1822 | 0.49 | -2.0 | |
2,224,872 | - | DvMF_1822 | 0.55 | -0.5 | |
2,224,894 | + | DvMF_1822 | 0.57 | -0.5 | |
2,224,902 | - | DvMF_1822 | 0.57 | -0.8 | |
2,224,957 | + | DvMF_1822 | 0.62 | +0.3 |
Or see this region's nucleotide sequence