Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1313
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,602,657 | - | DvMF_1312 | 0.21 | -0.3 | |
1,602,657 | - | DvMF_1312 | 0.21 | +0.1 | |
1,602,694 | + | DvMF_1312 | 0.25 | -0.6 | |
1,602,746 | - | DvMF_1312 | 0.30 | -0.3 | |
1,602,787 | - | DvMF_1312 | 0.35 | +0.1 | |
1,602,824 | + | DvMF_1312 | 0.38 | -0.5 | |
1,602,912 | + | DvMF_1312 | 0.47 | -0.5 | |
1,603,438 | - | -0.6 | |||
1,603,439 | - | +0.3 | |||
1,603,631 | + | DvMF_1313 | 0.10 | -0.6 | |
1,603,690 | - | DvMF_1313 | 0.17 | -0.7 | |
1,604,440 | - | -1.8 | |||
1,604,510 | + | +0.2 | |||
1,604,535 | + | -0.7 | |||
1,604,625 | + | -0.2 | |||
1,604,660 | - | -0.7 | |||
1,604,914 | + | DvMF_1314 | 0.12 | -0.5 | |
1,604,963 | - | DvMF_1314 | 0.15 | -1.2 | |
1,605,222 | + | DvMF_1314 | 0.33 | -0.1 | |
1,605,306 | + | DvMF_1314 | 0.39 | -1.0 |
Or see this region's nucleotide sequence