Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1214
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,492,870 | + | DvMF_1213 | 0.66 | -0.6 | |
1,492,870 | + | DvMF_1213 | 0.66 | -1.4 | |
1,492,989 | - | DvMF_1213 | 0.73 | -0.7 | |
1,493,078 | - | DvMF_1213 | 0.79 | -0.4 | |
1,493,393 | + | -2.5 | |||
1,493,406 | - | -0.9 | |||
1,493,820 | - | -0.2 | |||
1,494,007 | + | DvMF_1214 | 0.18 | -0.7 | |
1,494,077 | + | DvMF_1214 | 0.22 | +0.2 | |
1,494,127 | - | DvMF_1214 | 0.25 | -2.9 | |
1,494,578 | - | DvMF_1214 | 0.53 | +0.3 | |
1,495,038 | + | DvMF_1214 | 0.80 | -1.6 | |
1,495,217 | + | -0.6 | |||
1,495,355 | + | -0.5 | |||
1,495,451 | + | -0.1 | |||
1,495,503 | + | -1.3 | |||
1,495,612 | + | -1.4 | |||
1,495,805 | - | +0.1 | |||
1,495,811 | - | +0.1 | |||
1,495,842 | - | -1.0 | |||
1,496,305 | + | +1.3 | |||
1,496,313 | - | DvMF_1215 | 0.10 | -2.6 | |
1,496,315 | - | DvMF_1215 | 0.10 | -0.1 |
Or see this region's nucleotide sequence