Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0987
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,197,880 | - | DvMF_0986 | 0.37 | -0.8 | |
| 1,198,193 | + | DvMF_0986 | 0.65 | -2.5 | |
| 1,198,359 | - | DvMF_0986 | 0.79 | -3.0 | |
| 1,198,493 | + | +0.8 | |||
| 1,198,493 | + | +0.7 | |||
| 1,198,501 | - | -0.9 | |||
| 1,198,501 | - | -1.8 | |||
| 1,198,501 | - | -1.1 | |||
| 1,198,538 | + | -0.8 | |||
| 1,198,604 | - | -0.8 | |||
| 1,198,749 | - | -0.1 | |||
| 1,198,754 | - | +1.3 | |||
| 1,199,199 | + | DvMF_0987 | 0.42 | -0.4 | |
| 1,199,202 | - | DvMF_0987 | 0.42 | -3.8 | |
| 1,199,439 | - | DvMF_0987 | 0.71 | -3.5 | |
| 1,199,610 | - | -0.3 | |||
| 1,200,031 | - | -1.4 | |||
| 1,200,244 | + | -2.9 | |||
| 1,200,435 | + | DvMF_0988 | 0.13 | -0.5 | |
| 1,200,443 | - | DvMF_0988 | 0.13 | -0.6 | |
| 1,200,538 | + | DvMF_0988 | 0.19 | -2.4 |
Or see this region's nucleotide sequence