Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0941
Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.4 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,141,255 | - | -0.1 | |||
| 1,141,325 | + | +0.9 | |||
| 1,141,502 | - | DvMF_0941 | 0.20 | -0.1 | |
| 1,141,533 | + | DvMF_0941 | 0.22 | -0.7 | |
| 1,141,614 | - | DvMF_0941 | 0.27 | -0.6 | |
| 1,141,853 | - | DvMF_0941 | 0.41 | -1.7 | |
| 1,142,099 | + | DvMF_0941 | 0.56 | -1.4 | |
| 1,142,107 | - | DvMF_0941 | 0.56 | -1.7 | |
| 1,142,112 | - | DvMF_0941 | 0.56 | +0.1 | |
| 1,142,409 | + | DvMF_0941 | 0.74 | -0.4 | |
| 1,142,409 | + | DvMF_0941 | 0.74 | -1.2 | |
| 1,142,505 | + | DvMF_0941 | 0.80 | -1.1 | |
| 1,142,646 | - | DvMF_0941 | 0.88 | -2.4 | |
| 1,142,955 | - | DvMF_0942 | 0.14 | -0.2 | |
| 1,143,436 | - | DvMF_0942 | 0.76 | -0.6 | |
| 1,143,506 | + | DvMF_0942 | 0.85 | -0.5 | |
| 1,143,601 | + | -0.8 | |||
| 1,143,757 | - | -0.2 | |||
| 1,143,782 | + | +0.3 | |||
| 1,143,782 | + | -0.5 | |||
| 1,143,790 | - | -0.7 | |||
| 1,143,790 | - | -4.6 | |||
| 1,143,790 | - | -1.6 | |||
| 1,143,790 | - | -0.7 | |||
| 1,143,828 | + | -1.6 |
Or see this region's nucleotide sequence