Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0673 and DvMF_0674 overlap by 4 nucleotides DvMF_0674 and DvMF_0675 are separated by 69 nucleotides DvMF_0675 and DvMF_0676 are separated by 10 nucleotides
DvMF_0673: DvMF_0673 - glycosyl transferase group 1 (RefSeq), at 812,757 to 813,872
_0673
DvMF_0674: DvMF_0674 - hypothetical protein (RefSeq), at 813,869 to 814,453
_0674
DvMF_0675: DvMF_0675 - Acetyltransferase (isoleucine patch superfamily)-like protein (RefSeq), at 814,523 to 815,326
_0675
DvMF_0676: DvMF_0676 - glycosyl transferase group 1 (RefSeq), at 815,337 to 816,461
_0676
Position (kb) 814
815
816 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 813.541 kb on + strand, within DvMF_0673 at 813.544 kb on - strand, within DvMF_0673 at 813.596 kb on + strand, within DvMF_0673 at 813.636 kb on + strand, within DvMF_0673 at 813.674 kb on - strand, within DvMF_0673 at 813.727 kb on - strand, within DvMF_0673 at 813.744 kb on - strand at 813.748 kb on + strand, within DvMF_0673 at 813.802 kb on - strand at 814.060 kb on + strand, within DvMF_0674 at 814.185 kb on - strand, within DvMF_0674 at 814.310 kb on + strand, within DvMF_0674 at 814.337 kb on - strand, within DvMF_0674 at 814.393 kb on + strand, within DvMF_0674 at 814.544 kb on + strand at 814.679 kb on - strand, within DvMF_0675 at 815.541 kb on + strand, within DvMF_0676 at 815.568 kb on - strand, within DvMF_0676 at 815.575 kb on - strand, within DvMF_0676 at 815.662 kb on + strand, within DvMF_0676 at 816.000 kb on - strand, within DvMF_0676 at 816.273 kb on + strand, within DvMF_0676 at 816.281 kb on - strand, within DvMF_0676
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Rifampicin 0.4 mg/ml remove 813,541 + DvMF_0673 0.70 -0.7 813,544 - DvMF_0673 0.71 -1.2 813,596 + DvMF_0673 0.75 -1.3 813,636 + DvMF_0673 0.79 -0.8 813,674 - DvMF_0673 0.82 -0.8 813,727 - DvMF_0673 0.87 +0.6 813,744 - +0.3 813,748 + DvMF_0673 0.89 +0.0 813,802 - -0.3 814,060 + DvMF_0674 0.33 +0.9 814,185 - DvMF_0674 0.54 -1.5 814,310 + DvMF_0674 0.75 -1.4 814,337 - DvMF_0674 0.80 -0.8 814,393 + DvMF_0674 0.90 -1.0 814,544 + -0.8 814,679 - DvMF_0675 0.19 +0.9 815,541 + DvMF_0676 0.18 -0.2 815,568 - DvMF_0676 0.21 -3.5 815,575 - DvMF_0676 0.21 +0.1 815,662 + DvMF_0676 0.29 -2.2 816,000 - DvMF_0676 0.59 -1.4 816,273 + DvMF_0676 0.83 +0.3 816,281 - DvMF_0676 0.84 +0.3
Or see this region's nucleotide sequence