Experiment: MoYLS4 with Rifampicin 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0314 and DvMF_0315 overlap by 8 nucleotides DvMF_0315 and DvMF_0316 are separated by 2 nucleotides
DvMF_0314: DvMF_0314 - protein of unknown function DUF485 (RefSeq), at 363,941 to 364,399
_0314
DvMF_0315: DvMF_0315 - SSS sodium solute transporter superfamily (RefSeq), at 364,392 to 365,951
_0315
DvMF_0316: DvMF_0316 - putative signal transduction protein with CBS domains (RefSeq), at 365,954 to 367,684
_0316
Position (kb) 364
365
366 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 363.537 kb on + strand at 363.853 kb on + strand at 363.923 kb on - strand at 363.933 kb on - strand at 363.974 kb on + strand at 364.026 kb on - strand, within DvMF_0314 at 364.116 kb on + strand, within DvMF_0314 at 364.174 kb on - strand, within DvMF_0314 at 364.230 kb on - strand, within DvMF_0314 at 364.270 kb on - strand, within DvMF_0314 at 364.568 kb on - strand, within DvMF_0315 at 364.569 kb on - strand, within DvMF_0315 at 364.607 kb on - strand, within DvMF_0315 at 364.633 kb on - strand, within DvMF_0315 at 364.969 kb on - strand, within DvMF_0315 at 365.228 kb on - strand, within DvMF_0315 at 365.464 kb on + strand, within DvMF_0315 at 365.464 kb on + strand, within DvMF_0315 at 365.501 kb on + strand, within DvMF_0315 at 365.550 kb on - strand, within DvMF_0315 at 365.576 kb on - strand, within DvMF_0315 at 365.657 kb on + strand, within DvMF_0315 at 365.657 kb on + strand, within DvMF_0315 at 365.665 kb on - strand, within DvMF_0315 at 365.874 kb on - strand at 365.895 kb on + strand at 365.954 kb on - strand at 366.075 kb on + strand at 366.083 kb on - strand at 366.196 kb on + strand, within DvMF_0316 at 366.320 kb on - strand, within DvMF_0316 at 366.444 kb on + strand, within DvMF_0316 at 366.569 kb on + strand, within DvMF_0316 at 366.677 kb on - strand, within DvMF_0316
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Rifampicin 0.4 mg/ml remove 363,537 + -1.4 363,853 + +0.2 363,923 - -0.6 363,933 - -1.3 363,974 + -3.6 364,026 - DvMF_0314 0.19 -0.5 364,116 + DvMF_0314 0.38 -0.1 364,174 - DvMF_0314 0.51 -0.6 364,230 - DvMF_0314 0.63 -0.8 364,270 - DvMF_0314 0.72 +0.3 364,568 - DvMF_0315 0.11 -0.3 364,569 - DvMF_0315 0.11 -1.1 364,607 - DvMF_0315 0.14 -1.3 364,633 - DvMF_0315 0.15 -1.9 364,969 - DvMF_0315 0.37 -0.9 365,228 - DvMF_0315 0.54 -1.0 365,464 + DvMF_0315 0.69 +0.6 365,464 + DvMF_0315 0.69 -0.7 365,501 + DvMF_0315 0.71 -3.4 365,550 - DvMF_0315 0.74 -1.4 365,576 - DvMF_0315 0.76 +1.5 365,657 + DvMF_0315 0.81 -2.0 365,657 + DvMF_0315 0.81 -1.0 365,665 - DvMF_0315 0.82 -1.1 365,874 - -0.3 365,895 + +0.2 365,954 - -1.3 366,075 + +0.0 366,083 - -0.8 366,196 + DvMF_0316 0.14 +0.2 366,320 - DvMF_0316 0.21 -2.8 366,444 + DvMF_0316 0.28 -1.1 366,569 + DvMF_0316 0.36 -1.7 366,677 - DvMF_0316 0.42 -1.6
Or see this region's nucleotide sequence