Strain Fitness in Shewanella loihica PV-4 around Shew_3242

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
3,875,973	-		Shew_3241	0.68	+0.0
3,876,152	+		Shew_3241	0.77	-1.2
3,876,231	+		Shew_3241	0.82	-0.2
3,876,468	+				+1.2
3,876,476	-				+0.6
3,876,556	+				+0.1
3,876,564	-				-0.1
3,876,590	+				+0.1
3,876,591	-				-1.3
3,876,591	-				+0.2
3,876,598	-				-0.0
3,876,626	+				+0.1
3,876,626	+				-1.1
3,876,634	-				+0.7
3,876,634	-				+0.3
3,876,634	-				-0.0
3,876,634	-				-0.0
3,876,683	+				-2.3
3,876,691	-				-0.0
3,876,692	-				-0.0
3,876,849	-				-0.0
3,877,021	+				+0.3
3,877,021	+				-0.2
3,877,066	-		Shew_3242	0.11	-0.1
3,877,069	+		Shew_3242	0.12	+0.3
3,877,069	+		Shew_3242	0.12	+0.7
3,877,076	+		Shew_3242	0.12	+0.2
3,877,077	-		Shew_3242	0.12	+0.2
3,877,125	+		Shew_3242	0.17	+0.1
3,877,133	-		Shew_3242	0.18	+0.8
3,877,133	-		Shew_3242	0.18	+0.2
3,877,133	-		Shew_3242	0.18	+2.3
3,877,161	+		Shew_3242	0.21	-0.1
3,877,200	-		Shew_3242	0.25	-0.6
3,877,249	+		Shew_3242	0.30	+0.0
3,877,272	+		Shew_3242	0.33	-0.3
3,877,329	+		Shew_3242	0.39	-0.4
3,877,329	+		Shew_3242	0.39	-1.0
3,877,337	-		Shew_3242	0.39	+0.1
3,877,352	-		Shew_3242	0.41	-0.8
3,877,358	-		Shew_3242	0.42	+0.0
3,877,375	+		Shew_3242	0.43	+0.0
3,877,383	-		Shew_3242	0.44	+0.9
3,877,383	-		Shew_3242	0.44	+0.9
3,877,385	-		Shew_3242	0.44	+0.6
3,877,426	-		Shew_3242	0.49	-1.5
3,877,426	-		Shew_3242	0.49	+0.1
3,877,533	-		Shew_3242	0.60	-0.1
3,877,533	-		Shew_3242	0.60	-0.1
3,877,595	+		Shew_3242	0.66	-1.2
3,877,609	-		Shew_3242	0.68	+1.7
3,877,610	-		Shew_3242	0.68	-0.0
3,877,615	-		Shew_3242	0.68	+0.1
3,877,658	-		Shew_3242	0.73	+0.8
3,877,701	-		Shew_3242	0.77	+0.4
3,877,727	+		Shew_3242	0.80	-0.2
3,877,752	+		Shew_3242	0.83	-0.5
3,877,853	+				+2.1
3,877,853	+				-0.4
3,877,887	+				-0.1
3,878,204	+				+0.5
3,878,301	-				-2.7
3,878,317	-				-0.2
3,878,384	-				-0.0
3,878,496	-		Shew_3243	0.13	-0.5
3,878,564	+		Shew_3243	0.15	+0.3
3,878,572	-		Shew_3243	0.15	-0.3
3,878,911	-		Shew_3243	0.26	+0.1